CuGenDBv2

Gene ID	Cucsat.G9894
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	RNA-binding protein
Genome location	ctg1673:1369848..1372302
RNA-Seq Expression	Cucsat.G9894
Synteny	Cucsat.G9894
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]

5.35e-109

88.65

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYV+KFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG
        EAM VANMEYRAEKK KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG

XP_004135170.1 uncharacterized protein LOC101217717 [Cucumis sativus]

1.26e-127

100

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR
        EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR

XP_008446390.1 PREDICTED: uncharacterized protein LOC103489146 [Cucumis melo]

4.99e-109

88.17

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDG ++ ITLPEDVYVKKFF+KHPDS YHDAIKF  FNP PARIFAWRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG
        EAM  ANMEYRAEKKMKK AYSRLKQIARLQGKKPP NP+PSAIK+IQAEERK+VRDRFF+PKIKEIAQRLKEE+AAEMQER  GG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG

XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]

3.64e-109

88.71

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLL +TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGTIKTI+LPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG
        EAM VANMEYRAEKK+KK AY+RLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  GG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]

1.31e-109

89.19

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG
        EAM VANMEYRAEKK KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQQ3 Uncharacterized protein

6.08e-128

100

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR
        EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR

A0A1S3BEG4 uncharacterized protein LOC103489146

2.41e-109

88.17

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDG ++ ITLPEDVYVKKFF+KHPDS YHDAIKF  FNP PARIFAWRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG
        EAM  ANMEYRAEKKMKK AYSRLKQIARLQGKKPP NP+PSAIK+IQAEERK+VRDRFF+PKIKEIAQRLKEE+AAEMQER  GG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG

A0A5A7SZA7 Uncharacterized protein

2.41e-109

88.17

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDG ++ ITLPEDVYVKKFF+KHPDS YHDAIKF  FNP PARIFAWRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG
        EAM  ANMEYRAEKKMKK AYSRLKQIARLQGKKPP NP+PSAIK+IQAEERK+VRDRFF+PKIKEIAQRLKEE+AAEMQER  GG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG

A0A6J1DDQ7 uncharacterized protein LOC111019147

1.76e-109

88.71

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLL +TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGTIKTI+LPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG
        EAM VANMEYRAEKK+KK AY+RLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  GG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGG

A0A6J1GZF0 uncharacterized protein LOC111458914

6.36e-110

89.19

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG
        EAM VANMEYRAEKK KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26750.1 unknown protein

7.6e-50

53.51

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE
        MS+MKGDLL+KTR+LV GLA  EPVWLKAME +PPP FPR +G I+ I LPED YV+KF  KHP +   D  K   F P  AR++  RVLELKE G++E 
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEE

Query:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG
        +AM+VANMEY +E+K  K AY RLK++A +Q K PP  PYPSA K +  + +   +DRF  P ++ +  +LK E+   +Q+RTGG
Subjt:  EAMTVANMEYRAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGG

Sequences

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CDS sequence

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ATGTCCTTCATGAAAGGAGACTTGCTAACTAAGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAGCAGGCGCCACCTCCTTC
ATTTCCCCGAGTAGATGGAACAATTAAGACAATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCAAGAAACATCCAGACTCATATTACCATGATGCCATCAAGT
TCTGTGGTTTTAATCCTCCCCCAGCCCGAATATTTGCCTGGCGAGTGCTTGAACTGAAGGAACAAGGTGTCAATGAGGAGGAAGCCATGACAGTAGCCAACATGGAATAC
CGGGCAGAGAAAAAGATGAAAAAGAATGCGTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCGTAACCCTTATCCAAGTGCTATAAAGGAGAT
ACAAGCCGAGGAAAGGAAATTCGTCCGGGACCGTTTCTTCGATCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGAAAGAACGG
GAGGCGGCCGGTGA

mRNA sequence

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Protein sequence

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MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPSFPRVDGTIKTITLPEDVYVKKFFKKHPDSYYHDAIKFCGFNPPPARIFAWRVLELKEQGVNEEEAMTVANMEY
RAEKKMKKNAYSRLKQIARLQGKKPPRNPYPSAIKEIQAEERKFVRDRFFDPKIKEIAQRLKEERAAEMQERTGGGR

Cucsat.G9894 (gene) of Cucumber (B10) v3 genome