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Cucsat.G996 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G996
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S acidic ribosomal protein P1-like
Genome locationctg1:6411091..6412460
RNA-Seq ExpressionCucsat.G996
SyntenyCucsat.G996
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]1.93e-53100Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]8.73e-5094.79Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

XP_022144008.1 60S acidic ribosomal protein P1-like [Momordica charantia]7.55e-4486.46Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]4.76e-4286.46Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+ LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGA GG AAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.68e-4790.62Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIAT+VKAA V DVESYW+GLFAKLAEKR+IGDLILNVGAGGGAAVAAA PA G AGG AAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein9.34e-54100Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

A0A1S3AUG9 60S acidic ribosomal protein P1-like4.23e-5094.79Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

A0A5D3DB57 60S acidic ribosomal protein P1-like4.23e-5094.79Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MSTGEIACSYAALILYDDNIPITAEKIATLVKAA VSDVESYWY LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAA GGAAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

A0A6J1CS45 60S acidic ribosomal protein P1-like3.66e-4486.46Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST EIACSYAA+ILYDD I ITAEKIA LVKAA VS V+SYWY LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGAAGG AAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

A0A6J1ICK4 60S acidic ribosomal protein P1-like2.30e-4286.46Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MS GEIACSYAALILYDDNIP+TAEK+ATLVKAA V D ESYW+ LFAKLAEKR+IGDLI+NVGAGGGAAVAAA PAGGA GG AAAAAPPPEEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-23.0e-2165.98Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I IT++KIATLVKAA V ++ESYW  LFAK+AEKR++ DLI+NVGAGGG   A  + A  AA GGAAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

P29763 60S acidic ribosomal protein P12.5e-2065.62Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST E+AC+YAALIL+DD + ITA+ I T+ KAA V +VE YW  LFAKL  K+S+ DLI NVGAGGGAA AAAAPA G  G  AA AAP  EEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

P52855 60S acidic ribosomal protein P11.4e-2372.16Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAA-VAAAAPAGGAAGGGAAAAAPPPEEKK
        M++GE+AC YAALIL DD I ITAEKIAT+VKAA +  VESYW  LFAKL EKR++ DLIL+VG+GGGAA VAAAAPAGGA    AAAAAP  EEKK
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAA-VAAAAPAGGAAGGGAAAAAPPPEEKK

Q8LCW9 60S acidic ribosomal protein P1-11.3e-2169.7Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP    A GG AAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

Q8LEQ0 60S acidic ribosomal protein P1-39.3e-2371.72Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family9.6e-2369.7Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP    A GG AAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

AT1G01100.2 60S acidic ribosomal protein family9.6e-2369.7Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP    A GG AAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

AT1G01100.4 60S acidic ribosomal protein family9.6e-2369.7Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA VS +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP    A GG AAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

AT5G47700.1 60S acidic ribosomal protein family6.6e-2471.72Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK

AT5G47700.2 60S acidic ribosomal protein family6.6e-2471.72Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVKAA V+ +ESYW  LFAK+AEKR++ DLI+NVGA  GGGA VAAAAP   AAGGGAAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGA--GGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCCTAGAACATCCCTGCGCAGTGAAGAACGCCCGTTTCGATCTGTCTAAAATGTCGACCGGAGAAATTGCCTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATAT
CCCTATTACCGCCGAAAAGATTGCTACGCTTGTGAAGGCAGCTAAGGTTTCCGATGTGGAGTCTTACTGGTATGGTCTCTTTGCCAAGCTGGCTGAGAAGCGTAGCATTG
GAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGTGCTGCAGTCGCTGCTGCTGCACCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCTGCTCCACCACCGGAA
GAGAAAAAGGTATGGAATAGCCAATTTCGTTCCTATGATCGACCCATGTATTCTATTTTTCTTCAGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ACCCTAGAACATCCCTGCGCAGTGAAGAACGCCCGTTTCGATCTGTCTAAAATGTCGACCGGAGAAATTGCCTGCTCTTACGCTGCTCTCATCCTCTACGATGACAATAT
CCCTATTACCGCCGAAAAGATTGCTACGCTTGTGAAGGCAGCTAAGGTTTCCGATGTGGAGTCTTACTGGTATGGTCTCTTTGCCAAGCTGGCTGAGAAGCGTAGCATTG
GAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGTGCTGCAGTCGCTGCTGCTGCACCAGCTGGCGGAGCTGCTGGTGGCGGTGCTGCCGCAGCTGCTCCACCACCGGAA
GAGAAAAAGGTATGGAATAGCCAATTTCGTTCCTATGATCGACCCATGTATTCTATTTTTCTTCAGTGTTAA
Protein sequenceShow/hide protein sequence
TLEHPCAVKNARFDLSKMSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLILNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPE
EKKVWNSQFRSYDRPMYSIFLQC