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HG10000101 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000101
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr09:1001233..1002073
RNA-Seq ExpressionHG10000101
SyntenyHG10000101
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0050664 - oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS72636.1 hypothetical protein M569_02121, partial [Genlisea aurea]2.0e-0758.82Show/hide
Query:  VDIQSFSMGHIDVVVECKKGK-RWRFTGSYGNPIQEKRSDSWKLLKRLHNR
        VDI+SFS  HID V+  + G  +WR TG YGNP+Q  RSDSW LL RLH++
Subjt:  VDIQSFSMGHIDVVVECKKGK-RWRFTGSYGNPIQEKRSDSWKLLKRLHNR

KAF4349753.1 hypothetical protein G4B88_029501, partial [Cannabis sativa]1.5e-0758.33Show/hide
Query:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        +V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

KAF4363712.1 hypothetical protein G4B88_030211, partial [Cannabis sativa]1.5e-0758.33Show/hide
Query:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        +V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

KAF4379607.1 hypothetical protein F8388_023624 [Cannabis sativa]2.0e-0759.57Show/hide
Query:  VDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  VDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

XP_030936723.1 uncharacterized protein LOC115961982 [Quercus lobata]1.8e-0848.39Show/hide
Query:  MLFGKNCDKVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRLHNRKRL
        +L+ KN  +V+++S S+ HID V+    GK W+FTG YGNP   +RS+SW LL +LH R  L
Subjt:  MLFGKNCDKVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRLHNRKRL

TrEMBL top hitse value%identityAlignment
A0A7J6DUI7 Uncharacterized protein (Fragment)7.4e-0858.33Show/hide
Query:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        +V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

A0A7J6EZ57 Uncharacterized protein7.4e-0858.33Show/hide
Query:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        +V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

A0A7J6G9Q6 DUF4283 domain-containing protein9.7e-0859.57Show/hide
Query:  VDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        V ++SFS+GHID +V+C   + WRFTG YGNP    RSDSW+LL RL
Subjt:  VDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

A0A7J6I8Y9 DUF4283 domain-containing protein2.8e-0758.33Show/hide
Query:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL
        KV ++SFS+GHID +V+C     WRFTG YGNP    RS+SW+LL RL
Subjt:  KVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRL

S8D5C6 Uncharacterized protein (Fragment)9.7e-0858.82Show/hide
Query:  VDIQSFSMGHIDVVVECKKGK-RWRFTGSYGNPIQEKRSDSWKLLKRLHNR
        VDI+SFS  HID V+  + G  +WR TG YGNP+Q  RSDSW LL RLH++
Subjt:  VDIQSFSMGHIDVVVECKKGK-RWRFTGSYGNPIQEKRSDSWKLLKRLHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCGGGAAGAATTGTGATAAAGTGGATATTCAATCCTTCTCAATGGGCCATATCGATGTTGTTGTGGAATGCAAGAAAGGGAAAAGATGGAGATTTACT
GGATCCTATGGGAACCCGATTCAAGAGAAGCGAAGTGACTCATGGAAGTTGCTAAAGCGTCTCCACAATAGGAAGAGGCTCAATGGAGGGCTTAAAGGTGCCATT
GAGAGAAAATCTCAAGAATTGGCTAAGCTGGACAGAGGGGATAAAAAGGCAACGAATGAAGAGACTATTAGGTTGGAGAATGAGCTGGAGTCCATACTTGTTGAA
GAGGAGAAATATTGGAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCGGGAAGAATTGTGATAAAGTGGATATTCAATCCTTCTCAATGGGCCATATCGATGTTGTTGTGGAATGCAAGAAAGGGAAAAGATGGAGATTTACT
GGATCCTATGGGAACCCGATTCAAGAGAAGCGAAGTGACTCATGGAAGTTGCTAAAGCGTCTCCACAATAGGAAGAGGCTCAATGGAGGGCTTAAAGGTGCCATT
GAGAGAAAATCTCAAGAATTGGCTAAGCTGGACAGAGGGGATAAAAAGGCAACGAATGAAGAGACTATTAGGTTGGAGAATGAGCTGGAGTCCATACTTGTTGAA
GAGGAGAAATATTGGAAAATTTGA
Protein sequenceShow/hide protein sequence
MLFGKNCDKVDIQSFSMGHIDVVVECKKGKRWRFTGSYGNPIQEKRSDSWKLLKRLHNRKRLNGGLKGAIERKSQELAKLDRGDKKATNEETIRLENELESILVE
EEKYWKI