; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000112 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000112
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationChr09:1137949..1138506
RNA-Seq ExpressionHG10000112
SyntenyHG10000112
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]4.0e-3894.57Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA
        MASIGARS FRSFSGSARRAA+HIGSQ K SSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA

KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]1.8e-3894.57Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA
        MASIGARS FRSFSGSARRAA+HIGSQ KPS SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA

XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]5.2e-3894.51Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        MASIGARS FRSFSGSARRAA+HIGSQ KPS SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

XP_038901103.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]4.0e-3894.51Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        MASIGARS FRSFSGSARRAA+HIGSQA+PSS+SPFRMATNKPLSHRTFRCAP MSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

XP_038901106.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]4.0e-3894.51Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        MASIGARS FRSFSGSARRAA+HIGSQA+PSS+SPFRMATNKPLSHRTFRCAP MSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein2.8e-3794.44Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPE
        MASIGARS FRSFSGSARRAA+HIGSQ K SSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPE

A0A0A0LN06 Uncharacterized protein1.9e-3894.57Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA
        MASIGARS FRSFSGSARRAA+HIGSQ K SSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA

A0A0A0LT36 Uncharacterized protein8.7e-3994.57Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA
        MASIGARS FRSFSGSARRAA+HIGSQ KPS SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X16.2e-3792.31Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        MASIGARS FRSFSGSARRAA+HIGSQ KPSS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

A0A5D3BHH0 Protein NUCLEAR FUSION DEFECTIVE 66.2e-3792.31Show/hide
Query:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        MASIGARS FRSFSGSARRAA+HIGSQ KPSS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHS SSSALMTSMLSISRHSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial4.5e-0844.32Show/hide
Query:  GARSVFRSFSGSARRAASHIGSQAKPSSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPE
        GARS+ R  + S+R AA+  G  A  + S+P  FR    +       R   E+SFC+ES++P+HSA++SALMTS LSIS  + GWL +
Subjt:  GARSVFRSFSGSARRAASHIGSQAKPSSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein5.3e-1246.07Show/hide
Query:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        ARSVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

AT1G28395.2 unknown protein5.3e-1246.07Show/hide
Query:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        ARSVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

AT1G28395.3 unknown protein5.3e-1246.07Show/hide
Query:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG
        ARSVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+ +G
Subjt:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEG

AT1G28395.4 unknown protein3.4e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWL
        ARSVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+
Subjt:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWL

AT1G28395.5 unknown protein3.4e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWL
        ARSVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS+SR   GW+
Subjt:  ARSVFRSFSGSARRAASHIGSQAKPSSSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCGGTGCTAGGTCTGTTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTTCTCACATCGGTTCTCAAGCCAAGCCGTCATCAAGCTCTCCCTTTCG
CATGGCAACTAACAAGCCTCTCTCTCATCGAACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGTTGCGGTTGGCTTCCCGAAGGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATCGGTGCTAGGTCTGTTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTTCTCACATCGGTTCTCAAGCCAAGCCGTCATCAAGCTCTCCCTTTCG
CATGGCAACTAACAAGCCTCTCTCTCATCGAACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGTTGCGGTTGGCTTCCCGAAGGTGCATAA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSFSGSARRAASHIGSQAKPSSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSISRHSCGWLPEGA