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HG10000165 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000165
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncellulose synthase-like protein H1
Genome locationChr09:1644576..1644924
RNA-Seq ExpressionHG10000165
SyntenyHG10000165
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570895.1 Cellulose synthase-like protein H1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1550.88Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC
        FEVTKKG S+ ND+ E+ ED G+FTFDES LFV ATTI+MIQL AL IG                    +C                 KGRF IPWPTLC
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC

Query:  KSIALTLLFVYFAL
        KS A TLLFV+FAL
Subjt:  KSIALTLLFVYFAL

XP_022944069.1 cellulose synthase-like protein H1 [Cucurbita moschata]8.5e-1651.75Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC
        FEVTKKG S+ ND+ E++ED G+FTFDES LFV ATTI+MIQL ALSIG                    +C                 KGRF IPWPTLC
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC

Query:  KSIALTLLFVYFAL
        KS A TLLFV FAL
Subjt:  KSIALTLLFVYFAL

XP_023512253.1 cellulose synthase-like protein H1 [Cucurbita pepo subsp. pepo]1.5e-1751.72Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC
        FEVTKKGSS+ ND+ E++ED G+FTF+ES LF+ ATTI+MIQL ALSIG                    +C                 KGRF IPWPTLC
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC

Query:  KSIALTLLFVYFALKN
        KS ALTLLFV+FAL N
Subjt:  KSIALTLLFVYFALKN

XP_038902591.1 cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]3.3e-2056.03Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSI-----------------------------------GNVCKGRFEIPWPTLC
        MFEVTKKGSSS NDDGEMEEDS +FTFD+S LFV ATTIL+IQL ALSI                                   G + KGRF IPWPTLC
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSI-----------------------------------GNVCKGRFEIPWPTLC

Query:  KSIALTLLFVYFALKN
        KSI+LTLLFV   LKN
Subjt:  KSIALTLLFVYFALKN

XP_038902592.1 cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]3.3e-2056.03Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSI-----------------------------------GNVCKGRFEIPWPTLC
        MFEVTKKGSSS NDDGEMEEDS +FTFD+S LFV ATTIL+IQL ALSI                                   G + KGRF IPWPTLC
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSI-----------------------------------GNVCKGRFEIPWPTLC

Query:  KSIALTLLFVYFALKN
        KSI+LTLLFV   LKN
Subjt:  KSIALTLLFVYFALKN

TrEMBL top hitse value%identityAlignment
A0A6J1CHE2 cellulose synthase-like protein H13.2e-1349.55Show/hide
Query:  MFEVTKKGSSSLNDD-GEMEEDSGQFTFDESLLFVLATTILMIQLAAL------------SIGNVC------------------KGRFEIPWPTLCKSIA
        MFEVTKK SSS +DD GE++EDSG FTFDES LFV  TT+LM+QL AL             +G V                   KGRF IP+ T+CKS A
Subjt:  MFEVTKKGSSSLNDD-GEMEEDSGQFTFDESLLFVLATTILMIQLAAL------------SIGNVC------------------KGRFEIPWPTLCKSIA

Query:  LTLLFVYFALK
        LT+LFVY + K
Subjt:  LTLLFVYFALK

A0A6J1CI91 cellulose synthase-like protein H13.0e-1145.54Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG---------------NVC-----------------KGRFEIPWPTLCKSI
        +FEVTKK SSS N     + D G+ TFDES  FV  TTILMIQLAALSIG                +C                 KGR+ +PWPTLCKS 
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG---------------NVC-----------------KGRFEIPWPTLCKSI

Query:  ALTLLFVYFALK
        AL  LFV + +K
Subjt:  ALTLLFVYFALK

A0A6J1FV74 cellulose synthase-like protein H1 isoform X23.0e-1146.36Show/hide
Query:  MFEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSI--------------------------------GNVCKGRFEIPWPTLCKS
        +FE+TKK SSS +DD E  + D G+FTFDES +FV  TTILMIQLAAL I                                G   KG + +PWPTL KS
Subjt:  MFEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSI--------------------------------GNVCKGRFEIPWPTLCKS

Query:  IALTLLFVYF
         ALT LFVYF
Subjt:  IALTLLFVYF

A0A6J1FVZ4 cellulose synthase-like protein H14.1e-1651.75Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC
        FEVTKKG S+ ND+ E++ED G+FTFDES LFV ATTI+MIQL ALSIG                    +C                 KGRF IPWPTLC
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIG-------------------NVC-----------------KGRFEIPWPTLC

Query:  KSIALTLLFVYFAL
        KS A TLLFV FAL
Subjt:  KSIALTLLFVYFAL

A0A6J1FXB7 cellulose synthase-like protein H1 isoform X13.0e-1146.36Show/hide
Query:  MFEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSI--------------------------------GNVCKGRFEIPWPTLCKS
        +FE+TKK SSS +DD E  + D G+FTFDES +FV  TTILMIQLAAL I                                G   KG + +PWPTL KS
Subjt:  MFEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSI--------------------------------GNVCKGRFEIPWPTLCKS

Query:  IALTLLFVYF
         ALT LFVYF
Subjt:  IALTLLFVYF

SwissProt top hitse value%identityAlignment
Q339N5 Cellulose synthase-like protein H12.6e-0426.05Show/hide
Query:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGN-------------------------------------VCKGRFEIPWP
        +FEVT+K  S+ + D   +E + G+FTFDES +F+  T + M+ + A+++G                                      V  GR+ IPW 
Subjt:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGN-------------------------------------VCKGRFEIPWP

Query:  TLCKSIALTLLFVYFALKN
           K+  L  +F+ F  +N
Subjt:  TLCKSIALTLLFVYFALKN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCAC
GACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGACTTTATTGT
TTGTGTACTTTGCGTTAAAGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCAC
GACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGACTTTATTGT
TTGTGTACTTTGCGTTAAAGAACTAA
Protein sequenceShow/hide protein sequence
MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGNVCKGRFEIPWPTLCKSIALTLLFVYFALKN