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HG10000340 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000340
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAnaphase-promoting complex subunit 13
Genome locationChr09:3998638..4000468
RNA-Seq ExpressionHG10000340
SyntenyHG10000340
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0070979 - protein K11-linked ubiquitination (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR008401 - Apc13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042977.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]6.5e-1871.23Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLAL
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
KGN63398.1 hypothetical protein Csa_022587 [Cucumis sativus]3.1e-2073.68Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        ILGFRI LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE QPVDTDTWHDLALGNQ
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
TYK11109.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]6.5e-1871.23Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLAL
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
XP_008459198.1 PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]9.0e-2072.37Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLALGNQ
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
XP_038900774.1 anaphase-promoting complex subunit 13 isoform X4 [Benincasa hispida]9.7e-1471.43Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDD                  QEAQPVDTDTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
TrEMBL top hitse value%identityAlignment
A0A0A0LNL0 Anaphase-promoting complex subunit 131.5e-2073.68Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        ILGFRI LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE QPVDTDTWHDLALGNQ
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
A0A1S3CA59 Anaphase-promoting complex subunit 134.4e-2072.37Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLALGNQ
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
A0A5A7TMF9 Anaphase-promoting complex subunit 133.1e-1871.23Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLAL
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
A0A5D3CLL3 Anaphase-promoting complex subunit 133.1e-1871.23Show/hide
Query:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
        ILGFR  LNKKTPMAELSLGILIDILDEEWMRDTLPHDD                  QE+QPVDTDTWHDLAL
Subjt:  ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLAL
A0A6J1JH61 Anaphase-promoting complex subunit 131.8e-1369.84Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDD                  QEAQPVD DTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
SwissProt top hitse value%identityAlignment
Q8L981 Anaphase-promoting complex subunit 133.3e-0952.38Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DD                  QE Q  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
Arabidopsis top hitse value%identityAlignment
AT1G73177.1 bonsai2.4e-1052.38Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DD                  QE Q  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDD------------------QEAQPVDTDTWHDLALGNQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATTGGGTTTTAGAATCTCCCTTAACAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCA
TGATGATCAGGAGGCTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATATTGGGTTTTAGAATCTCCCTTAACAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCA
TGATGATCAGGAGGCTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGA
Protein sequenceShow/hide protein sequence
ILGFRISLNKKTPMAELSLGILIDILDEEWMRDTLPHDDQEAQPVDTDTWHDLALGNQ