CuGenDBv2

Gene ID	HG10000341
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)
Genome location	Chr09:4005560..4006192
RNA-Seq Expression	HG10000341
Synteny	HG10000341
Gene Ontology terms	GO:0006487 - protein N-linked glycosylation (biological process) GO:0009414 - response to water deprivation (biological process) GO:0009645 - response to low light intensity stimulus (biological process) GO:0019408 - dolichol biosynthetic process (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:1904423 - dehydrodolichyl diphosphate synthase complex (cellular component) GO:0045547 - dehydrodolichyl diphosphate synthase activity (molecular function)
InterPro domains	IPR038887 - Dehydrodolichyl diphosphate synthase complex subunit Nus1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571185.1 Anaphase-promoting complex subunit 13, partial [Cucurbita argyrosperma subsp. sororia]

4.7e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        M++KVELQKIGILGLQLIWHFLH I+S +YFV+GIATTLES+LIS GLLRKY HL+I+ ++YLAIVVDSDEAYN LK+IELLQWLASLGIRS+CLYDVEG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

XP_004148090.1 dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X2 [Cucumis sativus]

2.8e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIG+LGLQLIWHFLH IVS +YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

XP_031737305.1 dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X5 [Cucumis sativus]

2.8e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIG+LGLQLIWHFLH IVS +YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

XP_031737306.1 dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X6 [Cucumis sativus]

2.8e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIG+LGLQLIWHFLH IVS +YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

XP_038900449.1 dehydrodolichyl diphosphate synthase complex subunit nus1 [Benincasa hispida]

2.9e-43

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        M IKVELQKIGILGLQLIWHFLH IVSLYYFVIGIATTLES+LISWGLLRKYKHLNID LQYLAIVV+SDEAYN LK+IELLQWLASLGIRSVCLYDVEG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQY6 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)

1.3e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIG+LGLQLIWHFLH IVS +YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

A0A1S3CAU5 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)

3.9e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIGILGLQ+IWHFLH IVS  YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

A0A5A7THT7 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)

3.9e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        MSIKVELQKIGILGLQ+IWHFLH IVS  YFV+GIATTLES+LISWG   KYKHLNID +QYLAIVV+SDEAYN LK+IELL+WL SLGIRSVCLYD EG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

A0A6J1FSC8 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)

2.3e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        M++KVELQKIGILGLQLIWHFLH I+S +YFV+GIATTLES+LIS GLLRKY HL+I+ ++YLAIVVDSDEAYN LK+IELLQWLASLGIRS+CLYDVEG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

A0A6J1FTP6 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)

2.3e-38

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Query:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        M++KVELQKIGILGLQLIWHFLH I+S +YFV+GIATTLES+LIS GLLRKY HL+I+ ++YLAIVVDSDEAYN LK+IELLQWLASLGIRS+CLYDVEG
Subjt:  MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein

5.3e-19

45.65

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Query:  KIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG
        +IG LGL L+W F+H +VSL+Y V GI   +ES+ I+ GL +KY  ++++ L+ LA+VVD + A ++  V+ELLQWL ++G++ V L+D +G
Subjt:  KIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEG

Sequences

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CDS sequence

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ATGAGCATCAAGGTTGAACTTCAGAAGATTGGAATTCTTGGGCTTCAGCTGATATGGCATTTCCTACACTCTATTGTTAGCTTATATTACTTTGTGATTGGTATTGCCAC
AACACTTGAAAGCCATTTGATATCTTGGGGACTCCTACGCAAGTACAAACATCTTAATATAGACAGTCTCCAATATCTTGCCATTGTGGTCGATAGTGATGAAGCTTATA
ATATCTTAAAAGTTATTGAACTTCTGCAATGGTTAGCATCATTGGGCATTAGAAGCGTTTGCTTGTATGATGTTGAAGGTAATGATTTTGGTTCCATCCAAGAATTCTGA

mRNA sequence

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Protein sequence

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MSIKVELQKIGILGLQLIWHFLHSIVSLYYFVIGIATTLESHLISWGLLRKYKHLNIDSLQYLAIVVDSDEAYNILKVIELLQWLASLGIRSVCLYDVEGNDFGSIQEF

HG10000341 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome