; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000342 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000342
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDitrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)
Genome locationChr09:4006325..4008471
RNA-Seq ExpressionHG10000342
SyntenyHG10000342
Gene Ontology termsGO:0006487 - protein N-linked glycosylation (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0019408 - dolichol biosynthetic process (biological process)
GO:0030968 - endoplasmic reticulum unfolded protein response (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1904423 - dehydrodolichyl diphosphate synthase complex (cellular component)
GO:0045547 - dehydrodolichyl diphosphate synthase activity (molecular function)
InterPro domainsIPR036424 - Decaprenyl diphosphate synthase-like superfamily
IPR038887 - Dehydrodolichyl diphosphate synthase complex subunit Nus1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023007518.1 dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X1 [Cucurbita maxima]9.5e-6588.24Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV
        KS KYGSL+KAIYKFT VRQNYGEL AIALISS+E+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV

XP_023007519.1 dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X2 [Cucurbita maxima]4.3e-6582.88Show/hide
Query:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR
        K ++  +   NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIR
Subjt:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR

Query:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV
        YTEILHMGPLKS KYGSL+KAIYKFT VRQNYGEL AIALISS+E+
Subjt:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV

XP_023007520.1 dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X3 [Cucurbita maxima]7.1e-6088.71Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGE
        KS KYGSL+KAIYKFT VRQNYG+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGE

XP_031737302.1 dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1 [Cucumis sativus]1.6e-5990.32Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        +EPLQLN +GITLEFIS SDGKEAIARAANFLL+NKWRKTNMSGDH RC SESQMTEALKAVGCGG DPDLILVYGPTRCH GFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGE
        KS+KYGSLLKAIYKFT VRQNYG+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGE

XP_038900449.1 dehydrodolichyl diphosphate synthase complex subunit nus1 [Benincasa hispida]1.7e-6185.82Show/hide
Query:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR
        K ++  +  GNEPLQL+ +GITLEFISISDGKEAIARAANFLLENKWRKTNMSGDH +C SESQMTEAL AVGCGGPDPDLILVYGPTRCHLGFPAWRIR
Subjt:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR

Query:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE
        YTEILHMGPLKS+ YGSLLKAIYKFT VRQNYG+
Subjt:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE

TrEMBL top hitse value%identityAlignment
A0A0A0LQY6 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)7.6e-6090.32Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        +EPLQLN +GITLEFIS SDGKEAIARAANFLL+NKWRKTNMSGDH RC SESQMTEALKAVGCGG DPDLILVYGPTRCH GFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGE
        KS+KYGSLLKAIYKFT VRQNYG+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGE

A0A6J1G5U4 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)2.2e-5987.1Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        +EPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIRYTEI+HMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGE
        KS KYGSL+KAIYKFT VRQNYG+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGE

A0A6J1L369 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)3.4e-6088.71Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGE
        KS KYGSL+KAIYKFT VRQNYG+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGE

A0A6J1L559 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)2.1e-6582.88Show/hide
Query:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR
        K ++  +   NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIR
Subjt:  KDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIR

Query:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV
        YTEILHMGPLKS KYGSL+KAIYKFT VRQNYGEL AIALISS+E+
Subjt:  YTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV

A0A6J1L7W1 Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)4.6e-6588.24Show/hide
Query:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL
        NEPLQLNC+G TLEFIS SDGKEA+ARAA+FLL++KWRKTNMSGD N+CFSESQMTEALKAVGCGGPDPDLILVYGP+RCHLGFPAWRIRYTEILHMGPL
Subjt:  NEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPL

Query:  KSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV
        KS KYGSL+KAIYKFT VRQNYGEL AIALISS+E+
Subjt:  KSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEV

SwissProt top hitse value%identityAlignment
Q12063 Dehydrodolichyl diphosphate synthase complex subunit NUS12.3e-0525.58Show/hide
Query:  GNEPLQLNCE----GITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEIL
        GNE ++ N E     I +  +S  DG+E I      + E          D      +S++ + +      GP+PDL+L +GP+    GFP W IR TE  
Subjt:  GNEPLQLNCE----GITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEIL

Query:  HMGPLKSIKYGSLLKAIYKFTTVRQNYGE
               + Y   ++ + ++   + N G+
Subjt:  HMGPLKSIKYGSLLKAIYKFTTVRQNYGE

Q96E22 Dehydrodolichyl diphosphate synthase complex subunit NUS19.1e-1030.28Show/hide
Query:  NCNKDRSKPIGSGNEPLQ-LNCEGITLEFISISDGKEAIARAA----NFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHL
        +C+K   +   S ++  Q LNC  + ++ +S  DGK  I RAA      + + + R T++  D         +   L + GC  PDPDL+L +GP    L
Subjt:  NCNKDRSKPIGSGNEPLQ-LNCEGITLEFISISDGKEAIARAA----NFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHL

Query:  GFPAWRIRYTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE
        GF  W IR TEI+ +    +I Y     A+ ++    Q  G+
Subjt:  GFPAWRIRYTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE

Q99LJ8 Dehydrodolichyl diphosphate synthase complex subunit Nus15.0e-0828.87Show/hide
Query:  NCNKDRSKPIGSGNEPLQ-LNCEGITLEFISISDGKEAIARAA----NFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHL
        +C+K  ++   S ++  Q LNC    ++ +S  DGK  I RAA      + + + + T++  D       S           G PDPDL+L +GP    L
Subjt:  NCNKDRSKPIGSGNEPLQ-LNCEGITLEFISISDGKEAIARAA----NFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHL

Query:  GFPAWRIRYTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE
        GF  W+IR TEI+ +    +I Y     A+ ++    Q  G+
Subjt:  GFPAWRIRYTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGE

Arabidopsis top hitse value%identityAlignment
AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein1.0e-3258.77Show/hide
Query:  ITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNR-CFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPLKSIKYGSLL
        I LEFIS SD KEA+ +AAN LL+   + ++   D     F+ES + +AL+ VG     PDL+LVYGP R HLGFPAWR+RYTEI+HMG LK ++YGSLL
Subjt:  ITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNR-CFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWRIRYTEILHMGPLKSIKYGSLL

Query:  KAIYKFTTVRQNYG
        KAI+KFT V QNYG
Subjt:  KAIYKFTTVRQNYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTGTATTTCAGGTACACGCACAACTGTAACAAAGATAGATCCAAACCTATTGGTTCAGGGAATGAACCTCTCCAACTGAACTGTGAAGGCATTACTCTTGAGTT
CATATCAATCTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTGAAAATAAGTGGAGAAAAACCAACATGAGCGGAGATCACAACCGGTGCTTTTCTG
AATCTCAGATGACTGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCCTGATCCTGACCTCATTTTAGTATATGGGCCTACAAGATGTCACTTAGGGTTTCCTGCATGGAGG
ATCCGCTACACAGAGATTCTACACATGGGGCCATTGAAGTCCATAAAGTACGGTTCCCTGCTAAAAGCCATTTACAAGTTTACCACGGTGCGACAGAACTATGGTGAGTT
ACCTGCTATTGCCTTAATAAGTTCCACTGAAGTTTGTATATCTTGTCTTCATAATGTTAATGGTATATATTATGATTCTAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCTGTATTTCAGGTACACGCACAACTGTAACAAAGATAGATCCAAACCTATTGGTTCAGGGAATGAACCTCTCCAACTGAACTGTGAAGGCATTACTCTTGAGTT
CATATCAATCTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTGAAAATAAGTGGAGAAAAACCAACATGAGCGGAGATCACAACCGGTGCTTTTCTG
AATCTCAGATGACTGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCCTGATCCTGACCTCATTTTAGTATATGGGCCTACAAGATGTCACTTAGGGTTTCCTGCATGGAGG
ATCCGCTACACAGAGATTCTACACATGGGGCCATTGAAGTCCATAAAGTACGGTTCCCTGCTAAAAGCCATTTACAAGTTTACCACGGTGCGACAGAACTATGGTGAGTT
ACCTGCTATTGCCTTAATAAGTTCCACTGAAGTTTGTATATCTTGTCTTCATAATGTTAATGGTATATATTATGATTCTAAATGGTGA
Protein sequenceShow/hide protein sequence
MRLYFRYTHNCNKDRSKPIGSGNEPLQLNCEGITLEFISISDGKEAIARAANFLLENKWRKTNMSGDHNRCFSESQMTEALKAVGCGGPDPDLILVYGPTRCHLGFPAWR
IRYTEILHMGPLKSIKYGSLLKAIYKFTTVRQNYGELPAIALISSTEVCISCLHNVNGIYYDSKW