CuGenDBv2

Gene ID	HG10000403
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L34
Genome location	Chr09:4802773..4803749
RNA-Seq Expression	HG10000403
Synteny	HG10000403
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR008195 - Ribosomal protein L34Ae IPR018065 - Ribosomal protein L34e, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG8366344.1 hypothetical protein BUALT_Bualt17G0070100 [Buddleja alternifolia]

1.2e-55

98.33

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYR RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]

2.1e-55

98.33

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_011070999.1 60S ribosomal protein L34 [Sesamum indicum]

7.3e-56

98.33

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_022134504.1 60S ribosomal protein L34-like [Momordica charantia]

1.6e-55

97.5

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_038893923.1 60S ribosomal protein L34-like [Benincasa hispida]

9.5e-56

99.17

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

TrEMBL top hits

e value

%identity

Alignment

A0A6I9SPA1 60S ribosomal protein L34

3.5e-56

98.33

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1BYX4 60S ribosomal protein L34-like

7.8e-56

97.5

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1DF78 60S ribosomal protein L34

1.0e-55

98.33

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1HLN7 60S ribosomal protein L34-like

1.0e-55

98.33

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1I6I6 60S ribosomal protein L34-like

1.0e-55

98.33

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

SwissProt top hits

e value

%identity

Alignment

P40590 60S ribosomal protein L34

5.8e-56

94.17

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQK KEK AAK+
Subjt:  KIVKKVLKIQKAKEKLAAKS

P41098 60S ribosomal protein L34

1.5e-56

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q42351 60S ribosomal protein L34-1

1.9e-54

90.83

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q9FE65 60S ribosomal protein L34-2

1.2e-53

90.76

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

Q9LJW6 60S ribosomal protein L34-3

3.5e-53

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNR YGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G26880.1 Ribosomal protein L34e superfamily protein

1.3e-55

90.83

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

AT1G26880.2 Ribosomal protein L34e superfamily protein

4.4e-43

90.22

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSG AVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L34

8.6e-55

90.76

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

AT3G28900.1 Ribosomal protein L34e superfamily protein

2.5e-54

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNR YGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCCAGCGGCTCACTTACCGTAAGCGGCACAGCTATGCCACCAAGTCCAACCAGCACCGCGTCGTCAAAACCCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAA
GAGGGCCAGTGGTCCTAAATGCCCTGTTACTGGAAAGAGGATTCAAGGGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGGTTGGCCAGGAACCGCAGGACTG
TAAACCGCCCCTATGGTGGTGTATTGTCTGGAGGGGCTGTTAGAGAGAGGATTATAAGAGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAGAAGGTTTTGAAGATCCAG
AAGGCAAAGGAAAAACTAGCTGCCAAGAGCTAG

mRNA sequence

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Protein sequence

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MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQ
KAKEKLAAKS

HG10000403 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome