; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000438 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000438
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain-containing protein
Genome locationChr09:5148980..5156164
RNA-Seq ExpressionHG10000438
SyntenyHG10000438
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648955.1 hypothetical protein Csa_007901 [Cucumis sativus]2.2e-3646.7Show/hide
Query:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ
        MEV  FG++  T  W+HL CLPF+ Y DG YLNGVIYW+G+ K+++ +IY+L+VETEKIE I  L+V P+   S YG  I  +N  +YA I I  T   +
Subjt:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ

Query:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG
        VQLW MQ KD W++EFV+ D+ +  ++ F  L+K FEDG   F+    L    DKTG +IK K  +   S  +  L    C  +SLNF SLP IL G
Subjt:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG

TYK02998.1 F-box protein [Cucumis melo var. makuwa]1.9e-3747.09Show/hide
Query:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPNS-RYGKIQTFNSTIYAIIIMFTTRSQVQLWR
        M++  F R GTNR K + CLPF I   G+YLNG IYW+G+ +Q +F+IYALDVETEKIE+  TL+VG  S   G+IQT N +IY  + M+     +Q+WR
Subjt:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPNS-RYGKIQTFNSTIYAIIIMFTTRSQVQLWR

Query:  MQHKDSWIREFVIDDLPNNRLNG-FFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTIL
        MQ KDSWIR FVI D+P    +  +F L+K FE G ++F  +G LF +D +GKK+K+ T        T  + +    ++LNF SLP +L
Subjt:  MQHKDSWIREFVIDDLPNNRLNG-FFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTIL

XP_004141602.1 F-box protein At3g07870 [Cucumis sativus]2.2e-3646.7Show/hide
Query:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ
        MEV  FG++  T  W+HL CLPF+ Y DG YLNGVIYW+G+ K+++ +IY+L+VETEKIE I  L+V P+   S YG  I  +N  +YA I I  T   +
Subjt:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ

Query:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG
        VQLW MQ KD W++EFV+ D+ +  ++ F  L+K FEDG   F+    L    DKTG +IK K  +   S  +  L    C  +SLNF SLP IL G
Subjt:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]3.4e-3444.44Show/hide
Query:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS
        ME+FTF  +G  +W+H + LPF+++  G YLNGVIYW+G+   K+ E +IYALDV+TE++E  ATLE+GP+ + G I+ F   +YAII +       T  
Subjt:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS

Query:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMD-ESLNFSSLPTILSGD
        +++LWRMQ KDSWI+EF ID+         F LI  FEDG +L      +F LDK+ KKIKIKTL    S ++ +  + C    S+NF     IL+ D
Subjt:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMD-ESLNFSSLPTILSGD

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]3.1e-3546.53Show/hide
Query:  MEVFTFGRSGT----NRWKHLDCLPFIIYTDGAYLNGVIYWMG--QVKQDEFLIYALDVETEKIEFIATLEVGP---NSRYGKIQTFNSTIYAI-IIMFT
        M+V TF RSGT    N+W++L  LP  I+++GAYLNG IYW+G  + K++E+ IY LDVETEKIE    LE+ P    S+ G +Q FN ++YAI +I   
Subjt:  MEVFTFGRSGT----NRWKHLDCLPFIIYTDGAYLNGVIYWMG--QVKQDEFLIYALDVETEKIEFIATLEVGP---NSRYGKIQTFNSTIYAI-IIMFT

Query:  TRSQVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTN--GYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILS
        T + +Q+WRMQ KD WIREFV+DD+PN+       LIK FEDG IL   N   + +Y   TG+K  I        Y        C  +SLNF  LP IL+
Subjt:  TRSQVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTN--GYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILS

Query:  GD
        GD
Subjt:  GD

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ2 F-box domain-containing protein1.0e-3646.7Show/hide
Query:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ
        MEV  FG++  T  W+HL CLPF+ Y DG YLNGVIYW+G+ K+++ +IY+L+VETEKIE I  L+V P+   S YG  I  +N  +YA I I  T   +
Subjt:  MEVFTFGRS-GTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPN---SRYG-KIQTFNSTIYAII-IMFTTRSQ

Query:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG
        VQLW MQ KD W++EFV+ D+ +  ++ F  L+K FEDG   F+    L    DKTG +IK K  +   S  +  L    C  +SLNF SLP IL G
Subjt:  VQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFY-LDKTGKKIKIKTLLNPYSY-KTELTAVCCMDESLNFSSLPTILSG

A0A0A0KUJ1 FBA_3 domain-containing protein8.3e-3445.88Show/hide
Query:  MEVFTFG-RSGT-NRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGP-NSRY-GKIQTFNSTIYAII-IMFTTRSQV
        ME+  FG RS T   W+H  C P      GAYLNGVIYWMG+ K   ++IYALDVETE++E +A LEVGP N RY G I T N ++YA + I+    +++
Subjt:  MEVFTFG-RSGT-NRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGP-NSRY-GKIQTFNSTIYAII-IMFTTRSQV

Query:  QLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILSG
        Q+W MQ K+ WIREFV+ D  +  L     ++K  +DG   FF  G +   DKTG  IKI++L N    +T    +C + ESLNF S+  IL+G
Subjt:  QLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILSG

A0A1S3CB99 F-box protein At3g07870-like1.7e-3444.44Show/hide
Query:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS
        ME+FTF  +G  +W+H + LPF+++  G YLNGVIYW+G+   K+ E +IYALDV+TE++E  ATLE+GP+ + G I+ F   +YAII +       T  
Subjt:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS

Query:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMD-ESLNFSSLPTILSGD
        +++LWRMQ KDSWI+EF ID+         F LI  FEDG +L      +F LDK+ KKIKIKTL    S ++ +  + C    S+NF     IL+ D
Subjt:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMD-ESLNFSSLPTILSGD

A0A5A7T7C6 F-box protein3.7e-3445.64Show/hide
Query:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS
        ME+FTF  +G  +W+H + LPF+++  G YLNGVIYW+G+   K+ E +IYALDV+TE++E IATLE+GP  + G I+ F   +YAII +       T  
Subjt:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQ--VKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMF-----TTRS

Query:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILS
        +++LWRMQ KDSWI+EF ID+         F LI  FEDG +L      +F LDK+ KKIKIKT LN    + ++   C    S+NF  L  IL+
Subjt:  QVQLWRMQHKDSWIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILS

A0A5D3BVH7 F-box protein9.4e-3847.09Show/hide
Query:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPNS-RYGKIQTFNSTIYAIIIMFTTRSQVQLWR
        M++  F R GTNR K + CLPF I   G+YLNG IYW+G+ +Q +F+IYALDVETEKIE+  TL+VG  S   G+IQT N +IY  + M+     +Q+WR
Subjt:  MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPNS-RYGKIQTFNSTIYAIIIMFTTRSQVQLWR

Query:  MQHKDSWIREFVIDDLPNNRLNG-FFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTIL
        MQ KDSWIR FVI D+P    +  +F L+K FE G ++F  +G LF +D +GKK+K+ T        T  + +    ++LNF SLP +L
Subjt:  MQHKDSWIREFVIDDLPNNRLNG-FFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTTTCACGTTTGGTAGAAGTGGAACCAACCGGTGGAAGCATCTGGACTGCTTGCCTTTTATCATCTACACTGACGGTGCTTACTTGAATGGAGTCATC
TATTGGATGGGACAAGTAAAACAAGACGAGTTTTTGATTTATGCTCTTGATGTTGAAACTGAAAAAATTGAATTCATTGCAACCTTAGAAGTTGGCCCTAACTCA
AGGTACGGGAAAATTCAGACGTTTAATTCCACCATTTATGCAATTATTATTATGTTCACAACACGTAGTCAAGTTCAACTGTGGAGGATGCAACACAAAGATTCA
TGGATTAGAGAATTTGTTATTGATGACTTACCGAATAATAGGCTGAATGGATTCTTTCACCTTATTAAGCCCTTTGAAGATGGCGGGATATTATTTTTTACTAAT
GGATACTTATTTTACTTGGATAAAACTGGGAAGAAGATCAAGATAAAAACATTACTCAATCCATATTCATACAAGACAGAGCTTACAGCAGTTTGTTGTATGGAT
GAATCTTTGAATTTTAGTTCTCTCCCAACAATTTTGTCCGGAGATGATGGATGCTCTTTCCTAAATTTGTTTAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTTTCACGTTTGGTAGAAGTGGAACCAACCGGTGGAAGCATCTGGACTGCTTGCCTTTTATCATCTACACTGACGGTGCTTACTTGAATGGAGTCATC
TATTGGATGGGACAAGTAAAACAAGACGAGTTTTTGATTTATGCTCTTGATGTTGAAACTGAAAAAATTGAATTCATTGCAACCTTAGAAGTTGGCCCTAACTCA
AGGTACGGGAAAATTCAGACGTTTAATTCCACCATTTATGCAATTATTATTATGTTCACAACACGTAGTCAAGTTCAACTGTGGAGGATGCAACACAAAGATTCA
TGGATTAGAGAATTTGTTATTGATGACTTACCGAATAATAGGCTGAATGGATTCTTTCACCTTATTAAGCCCTTTGAAGATGGCGGGATATTATTTTTTACTAAT
GGATACTTATTTTACTTGGATAAAACTGGGAAGAAGATCAAGATAAAAACATTACTCAATCCATATTCATACAAGACAGAGCTTACAGCAGTTTGTTGTATGGAT
GAATCTTTGAATTTTAGTTCTCTCCCAACAATTTTGTCCGGAGATGATGGATGCTCTTTCCTAAATTTGTTTAAGAGATGA
Protein sequenceShow/hide protein sequence
MEVFTFGRSGTNRWKHLDCLPFIIYTDGAYLNGVIYWMGQVKQDEFLIYALDVETEKIEFIATLEVGPNSRYGKIQTFNSTIYAIIIMFTTRSQVQLWRMQHKDS
WIREFVIDDLPNNRLNGFFHLIKPFEDGGILFFTNGYLFYLDKTGKKIKIKTLLNPYSYKTELTAVCCMDESLNFSSLPTILSGDDGCSFLNLFKR