; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000443 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000443
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationChr09:5222350..5236018
RNA-Seq ExpressionHG10000443
SyntenyHG10000443
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]1.8e-12994.21Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSIPQLSRR SHRSIVSALPRPY D STIGLSSKT GAPL LDDKDFL TSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ+IEKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

XP_022148642.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Momordica charantia]3.7e-12791.47Show/hide
Query:  VVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS
        + ASAFTASL+FSVSS+NRTSSIP LSRRNS RS+VS LPRPY D STIGLSSK+I APL+LDDKDFLH STSY PI A+KGNPPIMPAVMTPGGPLDLS
Subjt:  VVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        IHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKM++AFTGQ +EKVQQYTERDRFLSVSE
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]9.7e-12891.12Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+PQLSRRNS RSIVSA+PRPY D STIGLSSKT+GAPL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]2.6e-13396.14Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSI QLSRRNSHRSIVSALPRPY D STIGLSSKT+G PL +DDKDFLHTSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ IEKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

XP_038902837.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X2 [Benincasa hispida]6.9e-13495.79Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSI QLSRRNSHRSIVSALPRPY D STIGLSSKT+G PL +DDKDFLHTSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVP
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ IEKVQQYTERDRFLSVSE P
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVP

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit3.1e-12489.19Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASLSFSV+S+NR SSI QLSRRNSHRSIVSA PRPY D STIGLSSKT GAPL LDDKDFL TSTSY PIVAR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ+IE +QQY +RDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit8.5e-13094.21Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSIPQLSRR SHRSIVSALPRPY D STIGLSSKT GAPL LDDKDFL TSTSYGPI ARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ+IEKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit1.8e-12791.47Show/hide
Query:  VVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS
        + ASAFTASL+FSVSS+NRTSSIP LSRRNS RS+VS LPRPY D STIGLSSK+I APL+LDDKDFLH STSY PI A+KGNPPIMPAVMTPGGPLDLS
Subjt:  VVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        IHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKM++AFTGQ +EKVQQYTERDRFLSVSE
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit4.7e-12891.12Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+PQLSRRNS RSIVSA+PRPY D STIGLSSKT+GAPL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit2.3e-12790.35Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL
        M VASAFTASL FSVSSHNR SS+PQLSRRNS RSIVSA+PRPY D STIGLSSKT+G PL LD+ DFLHTSTSYGPI+A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ +EKVQQYTERDRFLSVSE
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

SwissProt top hitse value%identityAlignment
A9IR54 ATP-dependent Clp protease proteolytic subunit6.3e-3745.73Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  +++QL+ L + + D DI +Y+N PGGS Y+ +AIYD M ++KP V T+C G+AAS GA LLA G+KG R+ +PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQ +E++   TERD F+S  +  S
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS

Q59993 ATP-dependent Clp protease proteolytic subunit 24.8e-3746.33Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQ +EK+Q+ TERD F+S  E
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

Q7W8X2 ATP-dependent Clp protease proteolytic subunit6.3e-3746.95Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  V++QL+ L + + D DI  Y+N PGGS Y+ +AIYD M +IKP V T+C G+AAS GA LLA G+KG R+ +PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQ +E++   TERD F+S  +  S
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS

Q7WK83 ATP-dependent Clp protease proteolytic subunit6.3e-3746.95Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  V++QL+ L + + D DI  Y+N PGGS Y+ +AIYD M +IKP V T+C G+AAS GA LLA G+KG R+ +PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQ +E++   TERD F+S  +  S
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPS

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic2.9e-9873.6Show/hide
Query:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PY D    GLSS   G+P+ +D+K     +  +G I A+KGNPP+MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        GGHVEDVRRQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE
Subjt:  GGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.9e-3442.55Show/hide
Query:  STSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV
        S+ Y P  A+   PP M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TV
Subjt:  STSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV

Query:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        C G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ++EK+ Q T+RD F+S  E
Subjt:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

AT1G11750.1 CLP protease proteolytic subunit 62.0e-9973.6Show/hide
Query:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PY D    GLSS   G+P+ +D+K     +  +G I A+KGNPP+MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        GGHVEDVRRQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE
Subjt:  GGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

AT1G11750.2 CLP protease proteolytic subunit 62.6e-9971.48Show/hide
Query:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDK----------DFLHTSTSY---GPIVARKGNPPIMPAVMTPGG
        LSFS  + N + +S    ++RN  R IVSAL  PY D    GLSS   G+P+ +D+K          + L +ST Y   G I A+KGNPP+MP+VMTPGG
Subjt:  LSFSVSSHN-RTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDK----------DFLHTSTSY---GPIVARKGNPPIMPAVMTPGG

Query:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP
        PLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMP
Subjt:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP

Query:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        N+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R KID+MYAAFTGQ +EKVQQYTERDRFLS SE
Subjt:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE

AT1G66670.1 CLP protease proteolytic subunit 31.5e-3342.77Show/hide
Query:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLS
        S++MIHQP    GG   ++  ++ E +  + K++K+++  TG+   +++  T+RD FL+
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLS

AT5G45390.1 CLP protease P46.9e-3138.18Show/hide
Query:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA
        G   D+  +L R RI+F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+A
Subjt:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA

Query:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE
        MPN+RIMIHQP  G  G   DV  Q  E + +++ +  + A  T ++ E+V +  +RDR++S  E
Subjt:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGAGACGTGCTTGAGTCAAGCGAGACAAGGATCAAACTCACCCCGCTAGTCATGTCAGATAGGGAGAGGCATTATAGGGACACTAGGGTTGAGGAACGA
CCCGTGTATGAGCCCACTAATGCTGATACGGGTTCATCAGATGCACACAGCCAATCCACTAACGACGAGATTGAGGAGAATCAATCACACGCGCCTGAGCTCGAG
GAGCATGTGCCAGAACCTCATGTAGATCATGACACTCACTCGCCGCATATCGAGCACGTGTCGCCTTCGCTGAGCCCATTACATCCAGAACCTACGAGGGCTCAG
AAACATATTTCACTCCACGACATAGATCGTAGAGTGTCGATGGTGGAGCATAAGCTGGATGATGTGCATTCAGATTTGAAGGGTCTAAAGTCTGATGTGATTGTG
CTTCAAGCCGGCGTGCAAACAGTCACCATCCTATTACGGTCCATGTGTCGGGGTCTAGGCTTGGAGTTCCCTGATCCAGAACCCATTCCTCCACCTTCCACCGAG
CCCTTTCCTCCGCCACCCTCCACCGATCCGTCCTTCCTCGCCACCCTCCCCCGAGCTCTGAATAAGCTCGAGAACACAGCGCCATTCCCACAAGCTTCGCTCAAA
ATGGTAGTAGCTTCAGCTTTTACTGCCTCTCTCAGTTTCTCTGTCTCTTCACACAATCGAACGTCGTCCATTCCTCAACTTTCTCGAAGAAATTCACACAGGTCG
ATAGTGTCTGCCTTGCCGAGGCCCTATGACGACCCTTCGACAATTGGATTATCGAGTAAAACAATTGGGGCACCTCTAACCCTTGACGATAAGGACTTTCTTCAC
ACCAGTACAAGTTATGGTCCTATAGTGGCTAGGAAAGGTAATCCACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTT
AGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCAATTGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCTGATATC
CTGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTGGCAATTTATGATTGTATGTCTTGGATAAAGCCGAAGGTTGGCACAGTGTGCTTCGGAGTT
GCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCCAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGG
GGTCATGTGGAGGATGTTAGGCGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAATTGACAAGATGTATGCTGCATTTACTGGCCAGACTATAGAGAAAGTA
CAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGGTACCATCGTGCAATGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGAGACGTGCTTGAGTCAAGCGAGACAAGGATCAAACTCACCCCGCTAGTCATGTCAGATAGGGAGAGGCATTATAGGGACACTAGGGTTGAGGAACGA
CCCGTGTATGAGCCCACTAATGCTGATACGGGTTCATCAGATGCACACAGCCAATCCACTAACGACGAGATTGAGGAGAATCAATCACACGCGCCTGAGCTCGAG
GAGCATGTGCCAGAACCTCATGTAGATCATGACACTCACTCGCCGCATATCGAGCACGTGTCGCCTTCGCTGAGCCCATTACATCCAGAACCTACGAGGGCTCAG
AAACATATTTCACTCCACGACATAGATCGTAGAGTGTCGATGGTGGAGCATAAGCTGGATGATGTGCATTCAGATTTGAAGGGTCTAAAGTCTGATGTGATTGTG
CTTCAAGCCGGCGTGCAAACAGTCACCATCCTATTACGGTCCATGTGTCGGGGTCTAGGCTTGGAGTTCCCTGATCCAGAACCCATTCCTCCACCTTCCACCGAG
CCCTTTCCTCCGCCACCCTCCACCGATCCGTCCTTCCTCGCCACCCTCCCCCGAGCTCTGAATAAGCTCGAGAACACAGCGCCATTCCCACAAGCTTCGCTCAAA
ATGGTAGTAGCTTCAGCTTTTACTGCCTCTCTCAGTTTCTCTGTCTCTTCACACAATCGAACGTCGTCCATTCCTCAACTTTCTCGAAGAAATTCACACAGGTCG
ATAGTGTCTGCCTTGCCGAGGCCCTATGACGACCCTTCGACAATTGGATTATCGAGTAAAACAATTGGGGCACCTCTAACCCTTGACGATAAGGACTTTCTTCAC
ACCAGTACAAGTTATGGTCCTATAGTGGCTAGGAAAGGTAATCCACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTT
AGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCAATTGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCTGATATC
CTGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTGGCAATTTATGATTGTATGTCTTGGATAAAGCCGAAGGTTGGCACAGTGTGCTTCGGAGTT
GCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCCAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGG
GGTCATGTGGAGGATGTTAGGCGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAATTGACAAGATGTATGCTGCATTTACTGGCCAGACTATAGAGAAAGTA
CAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGGTACCATCGTGCAATGTCTAG
Protein sequenceShow/hide protein sequence
MQRDVLESSETRIKLTPLVMSDRERHYRDTRVEERPVYEPTNADTGSSDAHSQSTNDEIEENQSHAPELEEHVPEPHVDHDTHSPHIEHVSPSLSPLHPEPTRAQ
KHISLHDIDRRVSMVEHKLDDVHSDLKGLKSDVIVLQAGVQTVTILLRSMCRGLGLEFPDPEPIPPPSTEPFPPPPSTDPSFLATLPRALNKLENTAPFPQASLK
MVVASAFTASLSFSVSSHNRTSSIPQLSRRNSHRSIVSALPRPYDDPSTIGLSSKTIGAPLTLDDKDFLHTSTSYGPIVARKGNPPIMPAVMTPGGPLDLSSVLF
RNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
GHVEDVRRQVNEAVQSRHKIDKMYAAFTGQTIEKVQQYTERDRFLSVSEVPSCNV