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HG10000511 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000511
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionComplex I-B22
Genome locationChr09:6043524..6047289
RNA-Seq ExpressionHG10000511
SyntenyHG10000511
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5090.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA K+VEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGT--VGDYG
        PP G   + DYG
Subjt:  PPEGT--VGDYG

KAG7035055.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-5090.18Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA K+VEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGT--VGDYG
        PP G   + DYG
Subjt:  PPEGT--VGDYG

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]1.4e-5091.07Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTID+LIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG--TVGDYG
        PP G   + DYG
Subjt:  PPEG--TVGDYG

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]2.4e-5095.19Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG
        PP G
Subjt:  PPEG

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]8.7e-5395.45Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGTVGDYG
        PPEG    YG
Subjt:  PPEGTVGDYG

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B226.7e-5191.07Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEA KHVEDLDTID+LIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG--TVGDYG
        PP G   + DYG
Subjt:  PPEG--TVGDYG

A0A6J1FYY7 Complex I-B221.1e-5095.19Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG
        PP G
Subjt:  PPEG

A0A6J1G8K3 Complex I-B225.7e-5089.29Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEA K+VEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGT--VGDYG
        PP G   + DYG
Subjt:  PPEGT--VGDYG

A0A6J1J845 Complex I-B221.1e-5095.19Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A KHVEDLD IDR+IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG
        PP G
Subjt:  PPEG

A0A6J1L2P5 Complex I-B221.7e-4988.39Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERFEA K+VEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEGT--VGDYG
        PP G   + +YG
Subjt:  PPEGT--VGDYG

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.2e-0932.74Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-
        M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+  K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R   
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-

Query:  -TPPEGTVGDYGP
           PE  + D+ P
Subjt:  -TPPEGTVGDYGP

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.4e-0832.74Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-
        M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE  K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R   
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-

Query:  -TPPEGTVGDYGP
           PE  + D+ P
Subjt:  -TPPEGTVGDYGP

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.0e-0831.86Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE  K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R   
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNP-

Query:  -TPPEGTVGDYGP
           PE  + D+ P
Subjt:  -TPPEGTVGDYGP

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.4e-4579.46Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F   + VED+D ID+LIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG--TVGDYG
        PP G   V +YG
Subjt:  PPEG--TVGDYG

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.6e-0934.02Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RFE  K+ +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein1.7e-4679.46Show/hide
Query:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F   + VED+D ID+LIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPEG--TVGDYG
        PP G   V +YG
Subjt:  PPEG--TVGDYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCCGTTCA
TCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCACAGAAACACGTGGAAGATCTTGACACAATAGACAGGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCCGAAGGGACAGTAGGAGATTATGGT
CCTTTACCGAGTGAAACGTTTCTCTCAAAAGAACCCATTTTATCCGATGTTGCTGAAAACAATTTTCAAAAGATTACTCTATTGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCCGTTCA
TCGCCATCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCACAGAAACACGTGGAAGATCTTGACACAATAGACAGGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCCGAAGGGACAGTAGGAGATTATGGT
CCTTTACCGAGTGAAACGTTTCTCTCAAAAGAACCCATTTTATCCGATGTTGCTGAAAACAATTTTCAAAAGATTACTCTATTGTTATGA
Protein sequenceShow/hide protein sequence
MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAQKHVEDLDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGTVGDYG
PLPSETFLSKEPILSDVAENNFQKITLLL