; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000562 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000562
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtodermal factor 1
Genome locationChr09:6471657..6473626
RNA-Seq ExpressionHG10000562
SyntenyHG10000562
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571035.1 hypothetical protein SDJN03_29950, partial [Cucurbita argyrosperma subsp. sororia]1.1e-15183.02Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  L+ L LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGGT +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQPA+PMSFCSASV+PVPVP   +  PP       PP LPP FK PPLPQLPPLPPLP LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQHENWTNP Y+CYWRAVNPD KV V+FG++AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYP LSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG GHVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

XP_022944208.1 uncharacterized protein LOC111448725 [Cucurbita moschata]2.6e-14882.1Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  L+ L LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGGT +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQPA+ MSFCSASV+PVPVPAPV+          SPP LPP  K  PLPQLPPLPP   LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQHENWTNP Y+CYWRAVNPD KV V+FG++AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYP LSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG GHVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

XP_022985735.1 uncharacterized protein LOC111483701 [Cucurbita maxima]1.1e-15483.95Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  LSKL LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGGT +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQP +PMSFCSASV+PVP PAPV+  P        PP LPP  K PPLPQLPPLPPLP LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        E SACQHENWTNPDY+CYWRAVNPDTKV V+FGL+AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYPTLSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG  HVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

XP_023513005.1 uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo]7.0e-15483.33Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  LSKL LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACG+GNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGG  +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQPA+PMSFCSASV+PVPVPAPV+  P        PP +PP FK PPLPQLPP+PPLP LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQHENWTNPDY+CYWRAVNPD KV V+FG++AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYPTLSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG  HVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

XP_038900829.1 uncharacterized protein LOC120087893 [Benincasa hispida]6.7e-17391.98Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M PLSKLKLCFL A+LL ATA+GYAVVTGTVFCDQCKDG ISMFDYP+NGVKV VACGDGNGGVTY+REETTNLFGSFTMRFDGTPDLSGCYA +GGT Q
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        GTT DCGGAGGPPKSLRLMFRLFDMEMYVVDSLV+QPAKPMSFCSASVNPVPVPAPVIT PPSPSLP SPPPLPPSFK PPLPQLPPLPPLP LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQH+NWTNPDYRCYWRAVNPDTKV VIFGL+AAN+YGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNSLNFPYPT+SVVQR NWALLGSPRAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
        LTALRFKRANSGYGHVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

TrEMBL top hitse value%identityAlignment
A0A1S3C647 uncharacterized protein LOC1034973046.2e-12470Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISM--FDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT
        M PL K KLCFLA SL  ATA GY VV+G VFCD+CKDGQ+S+  FDYP+NGVKV +ACGDG GGVT LREE TN FG +TM F+GTPDLSGC A V G 
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISM--FDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT

Query:  VQGTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLP---HLP
         QG  T+C   GGPP+SL+L+FRL D+EMY VD LVSQP +PMSFCS+   PVP P P    P  PSLPS P       K PPLP+LPPLPP P    +P
Subjt:  VQGTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLP---HLP

Query:  PGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALL-G
          PFLEASACQHENWTNPDY+CYWRAVNPDTKVAVIFG +AA RYGTD+TLW GLQGRGDP++TLLREAITAFLNSY+SL+FPY +LSVVQ FN AL+ G
Subjt:  PGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALL-G

Query:  SPRAVLLTALRFKRANSGYGHVTCKFDPCQ
        S R+VL  ALRFK ANSG GHVTCKFDPC+
Subjt:  SPRAVLLTALRFKRANSGYGHVTCKFDPCQ

A0A5D3BLG6 Protodermal factor 16.2e-12470Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISM--FDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT
        M PL K KLCFLA SL  ATA GY VV+G VFCD+CKDGQ+S+  FDYP+NGVKV +ACGDG GGVT LREE TN FG +TM F+GTPDLSGC A V G 
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISM--FDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT

Query:  VQGTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLP---HLP
         QG  T+C   GGPP+SL+L+FRL D+EMY VD LVSQP +PMSFCS+   PVP P P    P  PSLPS P       K PPLP+LPPLPP P    +P
Subjt:  VQGTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLP---HLP

Query:  PGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALL-G
          PFLEASACQHENWTNPDY+CYWRAVNPDTKVAVIFG +AA RYGTD+TLW GLQGRGDP++TLLREAITAFLNSY+SL+FPY +LSVVQ FN AL+ G
Subjt:  PGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALL-G

Query:  SPRAVLLTALRFKRANSGYGHVTCKFDPCQ
        S R+VL  ALRFK ANSG GHVTCKFDPC+
Subjt:  SPRAVLLTALRFKRANSGYGHVTCKFDPCQ

A0A6J1CWR4 uncharacterized protein LOC1110155041.9e-14180.25Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M PL KL LCFLAASL +A A GYAVVTGTVFCDQCKDGQIS+FDYP+NG KVMVACGDGNGGVTY REETTNLFGSFTMRFDGTPDLSGCYAAVGGT  
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G    CGGA GP KSLRLMFR+FDMEMYVVDSL+SQPA PM FCS SVNPVP P   +T PP    PSSPPP       PPL +LP LPP   LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQHENWTNPDYRCYWRAVNP+TKV VIFG VAANRYGT++TLWNGLQGRGDP+RTLLREAITAFLNSYNSL++PYPT+SV+QR NWALLGSPRAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
        +TALRFKRANSG  H+TCKF PCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

A0A6J1FXU0 uncharacterized protein LOC1114487251.2e-14882.1Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  L+ L LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGGT +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQPA+ MSFCSASV+PVPVPAPV+          SPP LPP  K  PLPQLPPLPP   LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        EASACQHENWTNP Y+CYWRAVNPD KV V+FG++AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYP LSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG GHVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

A0A6J1JC51 uncharacterized protein LOC1114837015.2e-15583.95Show/hide
Query:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ
        M  LSKL LCFLAA+LL ATA+GYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDG PDLSGCYA VGGT +
Subjt:  MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQ

Query:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL
        G TTDCGGAG PP+SLRLMFRLF MEMYVVDSL+SQP +PMSFCSASV+PVP PAPV+  P        PP LPP  K PPLPQLPPLPPLP LPP PFL
Subjt:  GTTTDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFL

Query:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL
        E SACQHENWTNPDY+CYWRAVNPDTKV V+FGL+AANRYGTDLTLWNGLQGRGDP+RTLLREAITAFLNSYNS++FPYPTLSVV+  NWALLGS RAVL
Subjt:  EASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVL

Query:  LTALRFKRANSGYGHVTCKFDPCQ
         TALRFKRANSG  HVTCKFDPCQ
Subjt:  LTALRFKRANSGYGHVTCKFDPCQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein4.0e-8348.87Show/hide
Query:  LCFLAASLLWATAN---GYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT-VQGTTT
        L F+A  +L    N   GYA VTG+VFCDQCKDG+ S+FD+P++G+K+ V C D NG V   REETTN  G + MRFDGTPDLS CYA V    VQ   +
Subjt:  LCFLAASLLWATAN---GYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGT-VQGTTT

Query:  DCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFC----SASVNPVP----VPAPVITTPPSPSLP------------------------SSPPP
         C  A GP + L+LMF  F +E +  D+L++QP +P SFC    +A V P P    +P P +   P P +P                        + PPP
Subjt:  DCGGAGGPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFC----SASVNPVP----VPAPVITTPPSPSLP------------------------SSPPP

Query:  LPPSFKFPPLPQLP--PLPPLPHLPPGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLN
        L P    PP+   P   LPPLP +PP PF+E SAC H+ W  P+YRCYWRA+ PDTKVAV FGLVA   YGTD+T+   L GRG+ ++TLLREA TA LN
Subjt:  LPPSFKFPPLPQLP--PLPPLPHLPPGPFLEASACQHENWTNPDYRCYWRAVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLN

Query:  SYNSLNFPYPTLSVVQRFNWALLG-SPRAVLLTALRFKRANSGYGHVTCKFDPC
        SYNSL FPY +++V+   N ALLG S   VL+TA+RF +ANSG    TC+F  C
Subjt:  SYNSLNFPYPTLSVVQRFNWALLG-SPRAVLLTALRFKRANSGYGHVTCKFDPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCCTCTGTCCAAGCTCAAGCTTTGTTTTTTAGCCGCATCTCTTCTTTGGGCCACCGCGAATGGATACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAATGCAA
AGATGGTCAAATATCTATGTTCGATTATCCCTTGAACGGAGTTAAAGTGATGGTGGCTTGTGGGGATGGCAATGGGGGAGTTACTTATTTGAGAGAGGAGACTACAAATT
TGTTTGGAAGCTTTACGATGAGATTCGACGGAACACCGGATCTTAGCGGTTGTTATGCGGCAGTTGGTGGAACCGTACAGGGAACGACGACGGACTGTGGCGGAGCTGGC
GGTCCGCCAAAAAGTCTTAGGTTGATGTTTAGGTTGTTTGACATGGAAATGTATGTGGTTGATTCGTTGGTTTCTCAACCTGCTAAACCAATGTCGTTCTGTTCGGCATC
GGTTAATCCGGTCCCGGTCCCTGCACCCGTTATAACAACGCCACCATCTCCATCTCTGCCATCGTCTCCGCCTCCTCTGCCTCCTTCGTTTAAGTTTCCGCCGCTTCCTC
AACTGCCGCCACTTCCGCCACTGCCTCATCTGCCGCCTGGGCCATTCTTGGAAGCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGACTACAGATGCTACTGGAGG
GCAGTGAACCCAGACACAAAAGTAGCCGTTATTTTTGGGCTAGTAGCAGCCAACCGATACGGAACGGACCTGACCCTATGGAACGGCCTACAAGGCCGAGGGGACCCTCA
TAGGACCCTTTTAAGGGAAGCCATAACGGCGTTCCTTAATTCCTACAATTCCCTTAATTTCCCCTACCCTACACTTTCTGTGGTCCAACGCTTTAATTGGGCCTTATTGG
GCTCTCCACGGGCCGTCCTCCTCACTGCCCTTCGTTTCAAACGGGCCAACTCTGGTTATGGCCACGTCACCTGCAAATTCGACCCTTGCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCCTCTGTCCAAGCTCAAGCTTTGTTTTTTAGCCGCATCTCTTCTTTGGGCCACCGCGAATGGATACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAATGCAA
AGATGGTCAAATATCTATGTTCGATTATCCCTTGAACGGAGTTAAAGTGATGGTGGCTTGTGGGGATGGCAATGGGGGAGTTACTTATTTGAGAGAGGAGACTACAAATT
TGTTTGGAAGCTTTACGATGAGATTCGACGGAACACCGGATCTTAGCGGTTGTTATGCGGCAGTTGGTGGAACCGTACAGGGAACGACGACGGACTGTGGCGGAGCTGGC
GGTCCGCCAAAAAGTCTTAGGTTGATGTTTAGGTTGTTTGACATGGAAATGTATGTGGTTGATTCGTTGGTTTCTCAACCTGCTAAACCAATGTCGTTCTGTTCGGCATC
GGTTAATCCGGTCCCGGTCCCTGCACCCGTTATAACAACGCCACCATCTCCATCTCTGCCATCGTCTCCGCCTCCTCTGCCTCCTTCGTTTAAGTTTCCGCCGCTTCCTC
AACTGCCGCCACTTCCGCCACTGCCTCATCTGCCGCCTGGGCCATTCTTGGAAGCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGACTACAGATGCTACTGGAGG
GCAGTGAACCCAGACACAAAAGTAGCCGTTATTTTTGGGCTAGTAGCAGCCAACCGATACGGAACGGACCTGACCCTATGGAACGGCCTACAAGGCCGAGGGGACCCTCA
TAGGACCCTTTTAAGGGAAGCCATAACGGCGTTCCTTAATTCCTACAATTCCCTTAATTTCCCCTACCCTACACTTTCTGTGGTCCAACGCTTTAATTGGGCCTTATTGG
GCTCTCCACGGGCCGTCCTCCTCACTGCCCTTCGTTTCAAACGGGCCAACTCTGGTTATGGCCACGTCACCTGCAAATTCGACCCTTGCCAATAA
Protein sequenceShow/hide protein sequence
MYPLSKLKLCFLAASLLWATANGYAVVTGTVFCDQCKDGQISMFDYPLNGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGTPDLSGCYAAVGGTVQGTTTDCGGAG
GPPKSLRLMFRLFDMEMYVVDSLVSQPAKPMSFCSASVNPVPVPAPVITTPPSPSLPSSPPPLPPSFKFPPLPQLPPLPPLPHLPPGPFLEASACQHENWTNPDYRCYWR
AVNPDTKVAVIFGLVAANRYGTDLTLWNGLQGRGDPHRTLLREAITAFLNSYNSLNFPYPTLSVVQRFNWALLGSPRAVLLTALRFKRANSGYGHVTCKFDPCQ