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HG10000703 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000703
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationChr09:8183404..8183595
RNA-Seq ExpressionHG10000703
SyntenyHG10000703
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWY86723.1 ribosomal protein S11 [Prioria oxyphylla]9.5e-2390.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAIW V DQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
XP_040943184.1 30S ribosomal protein S11, chloroplastic-like [Gossypium hirsutum]9.5e-2393.65Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS STCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
YP_009462562.1 ribosomal protein S11 [Boehmeria spicata]2.1e-2290.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI  VVDQGMQRAEVMIKG GLGRDAALRAICRSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
YP_009559510.1 ribosomal protein S11 [Elaeagnus angustifolia]2.1e-2292.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
YP_009767040.1 ribosomal protein S11 [Tachigali costaricensis]5.6e-2390.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAIW V DQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
TrEMBL top hitse value%identityAlignment
A0A2K9VR21 30S ribosomal protein S11, chloroplastic1.0e-2290.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI  VVDQGMQRAEVMIKG GLGRDAALRAICRSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
A0A3Q9R015 30S ribosomal protein S11, chloroplastic1.0e-2292.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
A0A410HFC3 30S ribosomal protein S11, chloroplastic1.3e-2292.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
A0A6H0E8A1 Ribosomal protein S112.7e-2390.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAIW V DQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
H9LG03 30S ribosomal protein S11, chloroplastic1.3e-2292.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
SwissProt top hitse value%identityAlignment
A0ZZ68 30S ribosomal protein S11, chloroplastic3.6e-2592.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
B1A968 30S ribosomal protein S11, chloroplastic8.0e-2590.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGF+GTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
Q2L937 30S ribosomal protein S11, chloroplastic3.6e-2592.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
Q3V501 30S ribosomal protein S11, chloroplastic1.1e-2490.48Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI  VVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
Q6EW19 30S ribosomal protein S11, chloroplastic3.6e-2592.06Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGFKGTRRGTPFAAQTA GNAI AVVDQGMQRAEVMIKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S112.8e-2588.89Show/hide
Query:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL
        WSS  TCGF+GTRRGTPFAAQTA GNAI AVVDQGMQRAEV IKGPGLGRDAALRAI RSGIL
Subjt:  WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTCCTCCACCAGTACTTGTGGATTCAAGGGTACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGTAGGAAATGCTATTTGGGCAGTAGTGGATCAAGGTATGCA
ACGAGCCGAAGTTATGATAAAGGGCCCTGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTTGTAGAAGCGGTATACTATGA
mRNA sequenceShow/hide mRNA sequence
TGGTCCTCCACCAGTACTTGTGGATTCAAGGGTACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGTAGGAAATGCTATTTGGGCAGTAGTGGATCAAGGTATGCA
ACGAGCCGAAGTTATGATAAAGGGCCCTGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTTGTAGAAGCGGTATACTATGA
Protein sequenceShow/hide protein sequence
WSSTSTCGFKGTRRGTPFAAQTAVGNAIWAVVDQGMQRAEVMIKGPGLGRDAALRAICRSGIL