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HG10000729 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000729
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPatatin
Genome locationChr09:8601072..8602478
RNA-Seq ExpressionHG10000729
SyntenyHG10000729
Gene Ontology termsGO:0016042 - lipid catabolic process (biological process)
GO:0016298 - lipase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045868.1 patatin-like protein 3 [Cucumis melo var. makuwa]1.0e-0974Show/hide
Query:  VGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        VG+ LLD+ +SRVNL+TG+FE+LP EKGTN EALIKFA+RLS ER+LRLS
Subjt:  VGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

KAA0045868.1 patatin-like protein 3 [Cucumis melo var. makuwa]4.0e-0679.49Show/hide
Query:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        VS+    KGKLRTILSIDGGGIRGIIPG IL FLES+LQ
Subjt:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

KAA0045868.1 patatin-like protein 3 [Cucumis melo var. makuwa]3.9e-0964.29Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        LE+   VG+ LLD+ +SRVNL+TG++E+L  +KGTN EAL+KFAERLS+ER+LRLS
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

XP_008457875.1 PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo]1.9e-0863.16Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH
        LE+  +VG  LL K +SRVNL TG FEELP EKGTN +ALI+FA+RLS+ER+LR ++
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH

XP_011649367.1 patatin-like protein 3 [Cucumis sativus]1.2e-0576.92Show/hide
Query:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        VS+    KG+LRTILSIDGGGIRGIIPG IL FLES+LQ
Subjt:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

XP_011649367.1 patatin-like protein 3 [Cucumis sativus]5.0e-0964.91Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH
        LE+  +VG  LL K +SRVNL TG+FEELP EKGTN +ALI+FAERLS ER+LR ++
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH

XP_011649368.1 patatin-like protein 3 [Cucumis sativus]3.1e-0672.5Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        M S+  YRKG+ RTILSIDGGGIRGIIPG IL FLE++L+
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

XP_011649368.1 patatin-like protein 3 [Cucumis sativus]6.6e-0938.76Show/hide
Query:  KGKLRTILSIDGGGIRGIIPGTILTFLESKL------------------------------------------------QVGDALLDKGLSRVNLETGKF
        +G + TILSIDGGG+RG+IP  IL FLESKL                                                Q+G+ LL K +SRVNLE G  
Subjt:  KGKLRTILSIDGGGIRGIIPGTILTFLESKL------------------------------------------------QVGDALLDKGLSRVNLETGKF

Query:  EELPPEKGTNIEALIKFAERLSEERRLRL
        E L    G+N E LI+FA+ LS+ERR+RL
Subjt:  EELPPEKGTNIEALIKFAERLSEERRLRL

TrEMBL top hitse value%identityAlignment
A0A0A0LJW3 Patatin2.4e-0964.91Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH
        LE+  +VG  LL K +SRVNL TG+FEELP EKGTN +ALI+FAERLS ER+LR ++
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH

A0A5A7TQM4 Patatin9.3e-0963.16Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH
        LE+  +VG  LL K +SRVNL TG FEELP EKGTN +ALI+FA+RLS+ER+LR ++
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH

A0A5A7TQM4 Patatin1.5e-0672.5Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        M S+  YRKG+ RTILSIDGGGIRGIIPG IL FLE++L+
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

A0A5A7TQM4 Patatin9.3e-0963.16Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH
        LE+  +VG  LL K +SRVNL TG FEELP EKGTN +ALI+FA+RLS+ER+LR ++
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH

A0A5D3CQM6 Patatin4.9e-1074Show/hide
Query:  VGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        VG+ LLD+ +SRVNL+TG+FE+LP EKGTN EALIKFA+RLS ER+LRLS
Subjt:  VGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

A0A5D3CQM6 Patatin1.9e-0679.49Show/hide
Query:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        VS+    KGKLRTILSIDGGGIRGIIPG IL FLES+LQ
Subjt:  VSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

A0A5D3CQM6 Patatin1.9e-0964.29Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        LE+   VG+ LLD+ +SRVNL+TG++E+L  +KGTN EAL+KFAERLS+ER+LRLS
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 22.4e-0648.15Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLR
        +++ +++G+ LLDK +SRV+LETG + ++  E GTN + L KFA++LS+ERR R
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLR

A2YW91 Patatin-like protein 21.6e-0571.88Show/hide
Query:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        K K+ T+LSIDGGG+RGIIP TIL FLE +LQ
Subjt:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

B8AQW7 Patatin-like protein 18.4e-0760Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        +V +P    G+  T+L+IDGGGIRG+IPGTIL FLE++LQ
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

O23181 Patatin-like protein 38.4e-0741.98Show/hide
Query:  RTILSIDGGGIRGIIPGTILTF---LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        +  L ID   ++G +    ++    +E  ++VG+ALL K +SRVNLE+G ++ +  E  TN EAL +FA+ LSEER+LR S
Subjt:  RTILSIDGGGIRGIIPGTILTF---LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

Q6ZJD3 Patatin-like protein 22.4e-0648.15Show/hide
Query:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLR
        +++ +++G+ LLDK +SRV+LETG + ++  E GTN + L KFA++LS+ERR R
Subjt:  LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLR

Q6ZJD3 Patatin-like protein 21.6e-0571.88Show/hide
Query:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        K K+ T+LSIDGGG+RGIIP TIL FLE +LQ
Subjt:  KGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

Q84QY3 Patatin-like protein 18.4e-0760Show/hide
Query:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        +V +P    G+  T+L+IDGGGIRG+IPGTIL FLE++LQ
Subjt:  MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQ

Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A1.9e-0677.42Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        G L TILSIDGGGIRG+IP  IL FLES+LQ
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ

AT4G37050.1 PATATIN-like protein 45.9e-0841.98Show/hide
Query:  RTILSIDGGGIRGIIPGTILTF---LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS
        +  L ID   ++G +    ++    +E  ++VG+ALL K +SRVNLE+G ++ +  E  TN EAL +FA+ LSEER+LR S
Subjt:  RTILSIDGGGIRGIIPGTILTF---LESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLS

AT4G37070.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein7.3e-0670.97Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        G L TILS+DGGG+RGII G IL FLE +LQ
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ

AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein7.3e-0670.97Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        G L TILS+DGGG+RGII G IL FLE +LQ
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ

AT4G37070.3 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein7.3e-0670.97Show/hide
Query:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ
        G L TILS+DGGG+RGII G IL FLE +LQ
Subjt:  GKLRTILSIDGGGIRGIIPGTILTFLESKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGATCCTGGTTATAGGAAGGGGAAATTGAGAACAATTTTGAGCATTGATGGTGGTGGCATTAGAGGCATTATTCCCGGAACTATTCTAACTTTTCTCGAGTC
CAAGCTTCAGGTGGGAGATGCTTTGCTTGACAAAGGATTGTCAAGGGTAAATTTGGAAACTGGAAAATTTGAGGAACTTCCTCCTGAGAAAGGAACCAATATAGAAGCCC
TCATTAAGTTTGCTGAACGTTTGTCGGAGGAGAGAAGACTACGATTGTCCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGATCCTGGTTATAGGAAGGGGAAATTGAGAACAATTTTGAGCATTGATGGTGGTGGCATTAGAGGCATTATTCCCGGAACTATTCTAACTTTTCTCGAGTC
CAAGCTTCAGGTGGGAGATGCTTTGCTTGACAAAGGATTGTCAAGGGTAAATTTGGAAACTGGAAAATTTGAGGAACTTCCTCCTGAGAAAGGAACCAATATAGAAGCCC
TCATTAAGTTTGCTGAACGTTTGTCGGAGGAGAGAAGACTACGATTGTCCCATTGA
Protein sequenceShow/hide protein sequence
MVSDPGYRKGKLRTILSIDGGGIRGIIPGTILTFLESKLQVGDALLDKGLSRVNLETGKFEELPPEKGTNIEALIKFAERLSEERRLRLSH