; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000794 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000794
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosome assembly factor mrt4
Genome locationChr09:9566525..9570917
RNA-Seq ExpressionHG10000794
SyntenyHG10000794
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR001790 - Ribosomal protein L10P
IPR033867 - Ribosome assembly factor Mrt4
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR043164 - 50S ribosomal protein L10, insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157470.1 mRNA turnover protein 4 homolog [Momordica charantia]1.4e-11391.7Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPGDF+LYI+G DNSDVESA
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

XP_022933518.1 mRNA turnover protein 4 homolog [Cucurbita moschata]2.1e-11794.76Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPG+FELYIDGPDNSD+E+A
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

XP_022969955.1 mRNA turnover protein 4 homolog [Cucurbita maxima]1.8e-11694.32Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPG+FELYIDGPD SD+E+A
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

XP_023529350.1 mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]6.2e-11794.32Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+AS+EIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPG+FELYIDGPDNSD+E+A
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

XP_038902849.1 mRNA turnover protein 4 homolog [Benincasa hispida]2.1e-11795.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMV+LIRQAVENYNSIFVFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGRSAS+EI+PGL+KVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSAAT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRL+LVCRWSPGDFELYIDGPDNSDVESA
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

TrEMBL top hitse value%identityAlignment
A0A0A0LM77 Ribosome assembly factor mrt42.9e-9687.92Show/hide
Query:  MVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK-------LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVD
        MV+LIRQAVENYNS+FVFTVENMRNLKFKELREQLK       L   +NKVMQ+SLGRS SDEI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY D
Subjt:  MVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK-------LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVD

Query:  YDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPD
        YDYARTGSAA++KVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALG+R A FRLNLVCRWSPGDFELYIDGP+
Subjt:  YDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPD

Query:  NSDVESA
        NSDVESA
Subjt:  NSDVESA

A0A6J1DT71 Ribosome assembly factor mrt46.9e-11491.7Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPGDF+LYI+G DNSDVESA
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

A0A6J1F4Z2 Ribosome assembly factor mrt41.0e-11794.76Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPG+FELYIDGPDNSD+E+A
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

A0A6J1I1E2 Ribosome assembly factor mrt48.7e-11794.32Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSI+VFTVENMRNLKFKELREQLK    LFFGANKVMQVSLGR+ASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS AT+KVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRLNLVCRWSPG+FELYIDGPD SD+E+A
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

A0A6P4AGB2 Ribosome assembly factor mrt41.3e-9677.73Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQAVE+Y+SI+VF  ENMRNLKFKE RE++K     F G+NKVMQVSLGRSA+DE++PG+YKVSKLL G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNL KEEVERLFNEY DYD+ RTGS AT+KVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEGK LSPE+A ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDGPDNSDVESA
        FRL+L+CRWSP DFELYID P +SDVES+
Subjt:  FRLNLVCRWSPGDFELYIDGPDNSDVESA

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog6.3e-5650.22Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K   +FFG NKVM V+LGRS SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV+  F +Y + DYAR G+ AT  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A +L+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW--SPGDFELYIDGPDNSDVES
        ++++   W    G F+   D    S  ES
Subjt:  RLNLVCRW--SPGDFELYIDGPDNSDVES

Q7S302 Ribosome assembly factor mrt45.6e-3636.48Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQL---KLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT
        MPKSKR +   L++  KK RE K+ + + IR+ + NY   FVF+++NMRN   K++R++L   ++FFG  K+   +LG +  D    GL K+SK L G+ 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQL---KLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFVVCEEGKSL
        GL FTN    E++  F      D+AR GS AT+ + +  GPL               SH +EP LR+LG+P R+ KG V L        D+V+C+EG++L
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFVVCEEGKSL

Query:  SPESAGILRALGIRMATFRLNLVCRWSPGDFEL
              +L+   I ++ FR+ L+  WS    E+
Subjt:  SPESAGILRALGIRMATFRLNLVCRWSPGDFEL

Q86HD3 Ribosome assembly factor mrt43.2e-3938.14Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQ---LKLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT
        M KSKR+  V ++K  K   E KK +V  I+  V+ Y  I++FT ENMRN K K +R +    K  FG NKV+ V LG+S  DE++P L+K+++ L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQ---LKLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF
        GL FTN PK++V   F  Y + D+ R+G  + + + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++ +CE G +++PE + +L+     ++ F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRWSPGDFEL
        + ++   W+  +F L
Subjt:  RLNLVCRWSPGDFEL

Q9D0I8 mRNA turnover protein 4 homolog1.2e-5449.78Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K   +FFG NKVM V+LGRS SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV   F +Y + D+AR G+ AT  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A IL+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW--SPGDFELYIDGPDNSDVES
        ++ +   W    G F+   D    S  ES
Subjt:  RLNLVCRW--SPGDFELYIDGPDNSDVES

Q9UKD2 mRNA turnover protein 4 homolog1.2e-5449.34Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +F+F+V NMRN K K++R   K   +FFG NKVM V+LGRS SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLK---LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV   F +Y + DYAR G+ A   V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG  L+PE A +L+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW--SPGDFELYIDGPDNSDVES
        ++ +   W    G F+   D    S  ES
Subjt:  RLNLVCRW--SPGDFELYIDGPDNSDVES

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein5.5e-8768.51Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQL----KLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S++VF+ ENMRN+KFKE R+Q     K F G+NKVMQV+LGRSA DE++ G+YKVSKLL G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQL----KLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGL  T++PKEEVE LFN Y D D++RTGS A + VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEGK LSP+SA ILR L ++MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGDFELYIDG------PDNSDVESA
        F+LNL+CRWSP DFELY +        D SDVE++
Subjt:  FRLNLVCRWSPGDFELYIDG------PDNSDVESA

AT3G09200.1 Ribosomal protein L10 family protein1.1e-1025.52Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVER
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+    +  G N +M+ S+   + +     +  +  LL GN GL FT    +EV  
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVER

Query:  LFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL
           +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  LFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL

AT3G09200.2 Ribosomal protein L10 family protein9.5e-0730.36Show/hide
Query:  LLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL
        LL GN GL FT    +EV     +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L
Subjt:  LLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL

Query:  RALGIRMATFRL
          LGIR  ++ L
Subjt:  RALGIRMATFRL

AT3G11250.1 Ribosomal protein L10 family protein8.3e-1125.52Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVER
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+    +  G N +M+ S+   + +     +  +  LL GN GL FT    +EV  
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIFVFTVENMRNLKFKELREQLK----LFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVER

Query:  LFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL
           +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  LFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGTCGAAGCGCGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACACAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTA
CAACTCAATTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTTAAGGAACTCAGGGAGCAGCTGAAATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTTTCTC
TCGGTCGAAGTGCTTCCGATGAGATTCAACCAGGCCTGTACAAGGTTTCCAAGCTTCTGCATGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAG
AGGTTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACACAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGA
GCCTTCTCTACGGAAGCTTGGGTTGCCGGTTCGTTTGAATAAGGGTGTGGTGGAACTTGTATCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCGGAGTCAG
CTGGCATATTGCGTGCGTTGGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTCTGCAGATGGAGCCCCGGCGACTTTGAACTTTACATCGATGGACCAGATAATTCT
GATGTTGAATCTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAGTCGAAGCGCGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACACAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTA
CAACTCAATTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTTAAGGAACTCAGGGAGCAGCTGAAATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTTTCTC
TCGGTCGAAGTGCTTCCGATGAGATTCAACCAGGCCTGTACAAGGTTTCCAAGCTTCTGCATGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAG
AGGTTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACACAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGA
GCCTTCTCTACGGAAGCTTGGGTTGCCGGTTCGTTTGAATAAGGGTGTGGTGGAACTTGTATCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCGGAGTCAG
CTGGCATATTGCGTGCGTTGGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTCTGCAGATGGAGCCCCGGCGACTTTGAACTTTACATCGATGGACCAGATAATTCT
GATGTTGAATCTGCCTAA
Protein sequenceShow/hide protein sequence
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIFVFTVENMRNLKFKELREQLKLFFGANKVMQVSLGRSASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVE
RLFNEYVDYDYARTGSAATQKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNS
DVESA