; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000825 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000825
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionagamous-like MADS-box protein AGL103
Genome locationChr09:9899669..9900025
RNA-Seq ExpressionHG10000825
SyntenyHG10000825
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571340.1 MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4683.05Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSM+LI NEKSRKTTF KRK SLLRKAYELSTLCDVR  VFVYGPN NDQS ++L+TWP C E VN MIASYKANCLHKRARKAF LLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KK+E DMSKLRKDV EAR
Subjt:  KKIETDMSKLRKDVAEAR

KAG7011113.1 MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4683.05Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSM+LI NEKSRKTTF KRK SLLRKAYELSTLCDVR  VFVYGPN NDQS ++L+TWP C E VN MIASYKANCLHKRARKAF LLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KK+E DMSKLRKDV EAR
Subjt:  KKIETDMSKLRKDVAEAR

XP_008460878.1 PREDICTED: MADS-box protein SOC1-like [Cucumis melo]2.0e-5088.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR
        MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR  VFV+GPNQ NDQS LQLHTWP CP+ VN MIASYK NCLHKRARKAFGL+DFFS+R
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR

Query:  KKKIETDMSKLRKDVAEAR
        KKK+ETDMSKLRKDVAEAR
Subjt:  KKKIETDMSKLRKDVAEAR

XP_023512369.1 agamous-like MADS-box protein AGL103 [Cucurbita pepo subsp. pepo]2.3e-4683.05Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSM+LI NEKSRKTTF KRK SLLRKAYELSTLCDVR  VFVYGPN NDQS ++L+TWP C E VN MIASYKANCLHKRARKAF LLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KK+E DMSKLRKDV EAR
Subjt:  KKIETDMSKLRKDVAEAR

XP_038890378.1 floral homeotic protein FBP1-like [Benincasa hispida]6.5e-4986.44Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSMKLI NEKSRKTTFYKRKASLLRKAYELSTLCDVR  VFVYGPNQNDQS  Q+HTWP C E VN +IASYK NCLHKRA KA GLLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KKIETDMSKLRKDVA+AR
Subjt:  KKIETDMSKLRKDVAEAR

TrEMBL top hitse value%identityAlignment
A0A0A0LME6 MADS-box domain-containing protein2.1e-4581.51Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR
        MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR  V V+GPNQ NDQS LQLHTWP   + VN MIASYK NCL+KR RK+FGL+DFFS+R
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR

Query:  KKKIETDMSKLRKDVAEAR
        KKK+ETDMSKLRKDV+E R
Subjt:  KKKIETDMSKLRKDVAEAR

A0A1S3CDG6 MADS-box protein SOC1-like9.7e-5188.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR
        MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR  VFV+GPNQ NDQS LQLHTWP CP+ VN MIASYK NCLHKRARKAFGL+DFFS+R
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR

Query:  KKKIETDMSKLRKDVAEAR
        KKK+ETDMSKLRKDVAEAR
Subjt:  KKKIETDMSKLRKDVAEAR

A0A5D3BUZ8 MADS-box protein SOC1-like9.7e-5188.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR
        MGRGKLSMKLISNEKSRKTTF+KRKASLLRKAYELSTLCDVR  VFV+GPNQ NDQS LQLHTWP CP+ VN MIASYK NCLHKRARKAFGL+DFFS+R
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDR

Query:  KKKIETDMSKLRKDVAEAR
        KKK+ETDMSKLRKDVAEAR
Subjt:  KKKIETDMSKLRKDVAEAR

A0A6J1EVI5 agamous-like MADS-box protein AGL1031.1e-4683.05Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSM+LI NEKSRKTTF KRK SLLRKAYELSTLCDVR  VFVYGPN NDQS ++L+TWP C E VN MIASYKANCLHKRARKAF LLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KK+E DMSKLRKDV EAR
Subjt:  KKIETDMSKLRKDVAEAR

A0A6J1ICD8 agamous-like MADS-box protein AGL1032.7e-4581.36Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        MGRGKLSM+LI NEKSRKTTF KRK SLLRKAYELSTLCDVR  V V+GPN NDQS  +L+TWP C E VN MIASYKANCLHKRARKAF LLDFFS+RK
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAEAR
        KK+E DMSKLRKDV EAR
Subjt:  KKIETDMSKLRKDVAEAR

SwissProt top hitse value%identityAlignment
A9YDN6 MADS-box MEF2 type transcription factor MIG18.3e-0748.08Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ
        MGR K+ +K I ++++R  TF KRK  L +KA+ELS LC V   VF++G N+
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ

G4MWZ7 MADS-box MEF2 type transcription factor MIG18.3e-0748.08Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ
        MGR K+ +K I ++++R  TF KRK  L +KA+ELS LC V   VF++G N+
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ

Q38836 Agamous-like MADS-box protein AGL116.4e-0739.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN
        MGRGK+ +K I N  +R+ TF KR+  LL+KAYELS LCD    + V+          N N +ST++ +   +C +  N
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN

Q39295 Agamous-like MADS-box protein AGL154.9e-0756.25Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVY
        MGRGK+ +K I N  SR+ TF KR+A LL+KA+ELS LCD    V V+
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVY

Q9FIM0 Agamous-like MADS-box protein AGL824.4e-0837.14Show/hide
Query:  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRKKKIE
        + ++ I+N+K+R TT+ KRKASL +KA E STLC V T + VYGP +  D    +   WP     V  +I  YK + +    RK   +  F +D  K  E
Subjt:  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRKKKIE

Query:  TDMSK
            K
Subjt:  TDMSK

Arabidopsis top hitse value%identityAlignment
AT4G09960.1 K-box region and MADS-box transcription factor family protein4.5e-0839.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN
        MGRGK+ +K I N  +R+ TF KR+  LL+KAYELS LCD    + V+          N N +ST++ +   +C +  N
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN

AT4G09960.2 K-box region and MADS-box transcription factor family protein4.5e-0839.24Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN
        MGRGK+ +K I N  +R+ TF KR+  LL+KAYELS LCD    + V+          N N +ST++ +   +C +  N
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYG--------PNQNDQSTLQLHTWPSCPEHVN

AT5G26630.1 MADS-box transcription factor family protein4.8e-1035.34Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK
        M R K+ M  I NE +RK+TF KRK  LL+KA EL  LC V  +  V  P +     L    WPS  E  N++++ +K   +  + +K      F   R 
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRK

Query:  KKIETDMSKLRKDVAE
         K      KLRK+  E
Subjt:  KKIETDMSKLRKDVAE

AT5G55690.1 MADS-box transcription factor family protein5.2e-1245.57Show/hide
Query:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYK
        MGR  + M  I+NEK+R TT+ KRKA L +KA E STLC V T V VYGP++  D+  ++   WP     V E++  Y+
Subjt:  MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYK

AT5G58890.1 AGAMOUS-like 823.1e-0937.14Show/hide
Query:  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRKKKIE
        + ++ I+N+K+R TT+ KRKASL +KA E STLC V T + VYGP +  D    +   WP     V  +I  YK + +    RK   +  F +D  K  E
Subjt:  LSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQ-NDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRKKKIE

Query:  TDMSK
            K
Subjt:  TDMSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGGAAAACTGAGCATGAAACTAATCAGCAACGAGAAATCTCGAAAGACGACGTTTTATAAGCGGAAAGCAAGTCTGTTACGAAAAGCTTACGAGCTA
TCTACACTGTGCGATGTTCGTACTTATGTCTTTGTCTATGGCCCTAACCAAAATGACCAATCTACCCTCCAACTTCACACGTGGCCCTCGTGTCCAGAACACGTC
AACGAAATGATCGCTTCTTACAAGGCTAATTGTCTCCATAAACGTGCTCGCAAGGCCTTCGGTCTCCTCGACTTCTTCTCCGATAGGAAGAAGAAGATTGAAACC
GACATGTCCAAGCTTCGCAAGGATGTTGCTGAAGCCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGGAAAACTGAGCATGAAACTAATCAGCAACGAGAAATCTCGAAAGACGACGTTTTATAAGCGGAAAGCAAGTCTGTTACGAAAAGCTTACGAGCTA
TCTACACTGTGCGATGTTCGTACTTATGTCTTTGTCTATGGCCCTAACCAAAATGACCAATCTACCCTCCAACTTCACACGTGGCCCTCGTGTCCAGAACACGTC
AACGAAATGATCGCTTCTTACAAGGCTAATTGTCTCCATAAACGTGCTCGCAAGGCCTTCGGTCTCCTCGACTTCTTCTCCGATAGGAAGAAGAAGATTGAAACC
GACATGTCCAAGCTTCGCAAGGATGTTGCTGAAGCCAGGTAA
Protein sequenceShow/hide protein sequence
MGRGKLSMKLISNEKSRKTTFYKRKASLLRKAYELSTLCDVRTYVFVYGPNQNDQSTLQLHTWPSCPEHVNEMIASYKANCLHKRARKAFGLLDFFSDRKKKIET
DMSKLRKDVAEAR