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HG10000871 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000871
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionC2H2-like zinc finger protein
Genome locationChr09:10487287..10487676
RNA-Seq ExpressionHG10000871
SyntenyHG10000871
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46666.2 hypothetical protein Csa_005720 [Cucumis sativus]2.2e-2669.79Show/hide
Query:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        MD PLFSFN   S++TTNS    RRK TKFIKTTT         A   P+NITPPCSECGKKF SWKALFGHMRCHPERQWRGINPPP FL P +A
Subjt:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

PIN00584.1 hypothetical protein CDL12_26910 [Handroanthus impetiginosus]1.3e-2357.69Show/hide
Query:  SPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        +PL   +   +  TT S  NPR+KRTKF++  +S +     KPT   K  P    IT PC+ECGKKFWSWKALFGHMRCHPERQWRGINPPPNF RP   
Subjt:  SPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

Query:  GCRP
         C+P
Subjt:  GCRP

XP_004140060.1 zinc finger protein ZAT3 [Cucumis sativus]2.2e-2669.79Show/hide
Query:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        MD PLFSFN   S++TTNS    RRK TKFIKTTT         A   P+NITPPCSECGKKF SWKALFGHMRCHPERQWRGINPPP FL P +A
Subjt:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

XP_023512246.1 zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo]5.1e-2360.18Show/hide
Query:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTTSGTGKP--------TKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWR
        MDSP   LF F VFP  S ++S+    N RRKRTKFI+ TT+    P        +K AKK    AP  IT PC+ECGK FWSWKALFGHMRCHPERQWR
Subjt:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTTSGTGKP--------TKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWR

Query:  GINPPPNFLRPFA
        GINPPPNF R  A
Subjt:  GINPPPNFLRPFA

XP_038880579.1 zinc finger protein ZAT3-like [Benincasa hispida]1.4e-3379.79Show/hide
Query:  SFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        SF+VFP T T++S+SNPRRKRTKF+KTTTS  GKPTKQ KK    A NNITPPCSECGKKFWSWKALFGHMRCHPERQWRGI PPPN LRP  A
Subjt:  SFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

TrEMBL top hitse value%identityAlignment
A0A0A0KAW8 C2H2-type domain-containing protein1.1e-2669.79Show/hide
Query:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        MD PLFSFN   S++TTNS    RRK TKFIKTTT         A   P+NITPPCSECGKKF SWKALFGHMRCHPERQWRGINPPP FL P +A
Subjt:  MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

A0A2G9G5J5 Uncharacterized protein6.5e-2457.69Show/hide
Query:  SPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA
        +PL   +   +  TT S  NPR+KRTKF++  +S +     KPT   K  P    IT PC+ECGKKFWSWKALFGHMRCHPERQWRGINPPPNF RP   
Subjt:  SPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAA

Query:  GCRP
         C+P
Subjt:  GCRP

A0A5J5B067 Uncharacterized protein3.6e-2259.38Show/hide
Query:  VFPSTSTTNSTSNPRRKRTKFIKT------TTSGTGKPT--KQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAG
        +FP  S       PR+KRTK ++       +TSG  KP   K+   A   IT PCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF RP + G
Subjt:  VFPSTSTTNSTSNPRRKRTKFIKT------TTSGTGKPT--KQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAG

A0A6J1FVY9 zinc finger protein ZAT3-like4.2e-2362.39Show/hide
Query:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTTSGTGKP----TKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINP
        MDSP   LF F VFP  S ++S+    N RRKRTKFIK T +    P    +K AKK    AP  IT PC+ECGK FWSWKALFGHMRCHPERQWRGINP
Subjt:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTTSGTGKP----TKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINP

Query:  PPNFLRPFA
        PPNF R  A
Subjt:  PPNFLRPFA

A0A6J1J6W8 zinc finger protein ZAT3-like5.5e-2361.61Show/hide
Query:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTT-------SGTGKPTKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRG
        MDSP   LF FNVFP  S ++S+    N RRKRTKFIK T        S +   +K AKK    AP  IT PC+ECGK FWSWKALFGHMRCHPERQWRG
Subjt:  MDSP---LFSFNVFPSTSTTNST---SNPRRKRTKFIKTTT-------SGTGKPTKQAKK----APNNITPPCSECGKKFWSWKALFGHMRCHPERQWRG

Query:  INPPPNFLRPFA
        INPPPNF R  A
Subjt:  INPPPNFLRPFA

SwissProt top hitse value%identityAlignment
O65499 Zinc finger protein ZAT34.5e-2257.47Show/hide
Query:  NPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAGCRPGN
        +P++KRTK + +++S +     KP    K  PN   IT PC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN+  P AA  +  N
Subjt:  NPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAGCRPGN

Q9SIJ0 Zinc finger protein ZAT23.3e-1752.08Show/hide
Query:  DSPLFSFNVFPSTSTTNSTSNPRRKRTKFI-----KTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLR
        D P  S NV    +  +   NPRRKRTK        +++S   KP  Q     + I  PC+ECGK+F S KALFGHMRCHPERQWRGINPP NF R
Subjt:  DSPLFSFNVFPSTSTTNSTSNPRRKRTKFI-----KTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLR

Arabidopsis top hitse value%identityAlignment
AT2G17180.1 C2H2-like zinc finger protein2.4e-1852.08Show/hide
Query:  DSPLFSFNVFPSTSTTNSTSNPRRKRTKFI-----KTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLR
        D P  S NV    +  +   NPRRKRTK        +++S   KP  Q     + I  PC+ECGK+F S KALFGHMRCHPERQWRGINPP NF R
Subjt:  DSPLFSFNVFPSTSTTNSTSNPRRKRTKFI-----KTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLR

AT2G26940.1 C2H2-type zinc finger family protein1.4e-0760.61Show/hide
Query:  CSECGKKFWSWKALFGHMRCHPERQWRGINPPP
        C  CGK+F +  +LFGHMR HP+R W+GI PPP
Subjt:  CSECGKKFWSWKALFGHMRCHPERQWRGINPPP

AT4G35280.1 C2H2-like zinc finger protein3.2e-2357.47Show/hide
Query:  NPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAGCRPGN
        +P++KRTK + +++S +     KP    K  PN   IT PC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN+  P AA  +  N
Subjt:  NPRRKRTKFIKTTTSGT----GKPTKQAKKAPN--NITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAGCRPGN

AT4G35610.1 zinc finger (C2H2 type) family protein1.7e-0840.96Show/hide
Query:  STSNPRRKRTKFIKTTTSGTG---------KPTKQAKKA--PNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF
        S S  ++K    I T T   G         KP K+AK+   P    P C  CG+ F SWKA+FGHMR H +R ++G  PPP F
Subjt:  STSNPRRKRTKFIKTTTSGTG---------KPTKQAKKA--PNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF

AT5G56200.1 C2H2 type zinc finger transcription factor family3.8e-0861.11Show/hide
Query:  CSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFL
        C  C KKF S KAL+GHMR HP+R W+G+ PPP  L
Subjt:  CSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTCCTCTGTTTTCTTTCAACGTTTTCCCTTCCACTTCTACTACCAATTCAACTTCAAATCCCCGCCGGAAACGGACTAAATTCATCAAAACAACTACTTCTGG
AACCGGCAAGCCGACGAAGCAGGCAAAGAAAGCTCCCAACAATATCACTCCCCCCTGTTCCGAGTGCGGCAAGAAATTCTGGTCATGGAAGGCTCTGTTCGGCCATATGC
GCTGCCACCCTGAGCGTCAATGGCGAGGAATCAATCCGCCCCCAAATTTCCTCCGCCCTTTCGCCGCCGGATGCCGGCCGGGGAACGGTGGAGGACTACAAACCAAGGCC
ATATTCTGGAATTTTGGATTTGAATTTGCCTCCTCCTCCTCCACCAATGGAGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTCCTCTGTTTTCTTTCAACGTTTTCCCTTCCACTTCTACTACCAATTCAACTTCAAATCCCCGCCGGAAACGGACTAAATTCATCAAAACAACTACTTCTGG
AACCGGCAAGCCGACGAAGCAGGCAAAGAAAGCTCCCAACAATATCACTCCCCCCTGTTCCGAGTGCGGCAAGAAATTCTGGTCATGGAAGGCTCTGTTCGGCCATATGC
GCTGCCACCCTGAGCGTCAATGGCGAGGAATCAATCCGCCCCCAAATTTCCTCCGCCCTTTCGCCGCCGGATGCCGGCCGGGGAACGGTGGAGGACTACAAACCAAGGCC
ATATTCTGGAATTTTGGATTTGAATTTGCCTCCTCCTCCTCCACCAATGGAGGAGATTGA
Protein sequenceShow/hide protein sequence
MDSPLFSFNVFPSTSTTNSTSNPRRKRTKFIKTTTSGTGKPTKQAKKAPNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPFAAGCRPGNGGGLQTKA
IFWNFGFEFASSSSTNGGD