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HG10000941 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000941
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant transposase
Genome locationChr09:12036955..12037188
RNA-Seq ExpressionHG10000941
SyntenyHG10000941
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]2.1e-1663.01Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]2.1e-1665.71Show/hide
Query:  STNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  STNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

KAA0052811.1 transposase [Cucumis melo var. makuwa]4.7e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+G+++GLGF VT S +S S Q DKTI S ENKC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]6.2e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+S LKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

TYK28558.1 Plant transposase [Cucumis melo var. makuwa]8.0e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLG D+G++RGLGFGVT S +S S  KDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase1.0e-1663.01Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

A0A5A7TLJ2 Plant transposase1.0e-1665.71Show/hide
Query:  STNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  STNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

A0A5A7UH01 Transposase2.3e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+G+++GLGF VT S +S S Q DKTI S ENKC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

A0A5A7UVF2 Plant transposase3.0e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLGPD+ ++RGLGFGVT S +S S QKDKTI S E KC  L SDV ELK++V+S LKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

A0A5D3DYN2 Plant transposase3.9e-1661.64Show/hide
Query:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK
        ++ S++++DDAIS+VLG D+G++RGLGFGVT S +S S  KDKTI S E KC  L SDV ELK++V+SLLKDK
Subjt:  MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATTCGACTAATGTGGTTGATGATGCAATTAGTAAAGTTTTGGGTCCTGATCGTGGTCATATAAGAGGATTAGGATTCGGGGTGACTAGGTCAATGTTATCCAT
ATCAACTCAAAAAGACAAGACTATTGCATCTTTTGAAAACAAGTGCTCTCAGCTAGAGTCTGATGTGGTTGAGTTGAAGACGATGGTATCTTCTTTACTGAAGGATAAGG
TATGTTATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATTCGACTAATGTGGTTGATGATGCAATTAGTAAAGTTTTGGGTCCTGATCGTGGTCATATAAGAGGATTAGGATTCGGGGTGACTAGGTCAATGTTATCCAT
ATCAACTCAAAAAGACAAGACTATTGCATCTTTTGAAAACAAGTGCTCTCAGCTAGAGTCTGATGTGGTTGAGTTGAAGACGATGGTATCTTCTTTACTGAAGGATAAGG
TATGTTATTATTAA
Protein sequenceShow/hide protein sequence
MSHSTNVVDDAISKVLGPDRGHIRGLGFGVTRSMLSISTQKDKTIASFENKCSQLESDVVELKTMVSSLLKDKVCYY