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HG10000971 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000971
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSYP124 protein
Genome locationChr09:12616571..12618862
RNA-Seq ExpressionHG10000971
SyntenyHG10000971
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047889.1 uncharacterized protein E6C27_scaffold133G001630 [Cucumis melo var. makuwa]2.8e-5285.71Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWIGFELFTR
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWGLLIFGGYKFFTRGKG KDE W+ FELFT 
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWIGFELFTR

Query:  LTSENNLLMPLICEEGMTP
         TS NNL +P I EEGM P
Subjt:  LTSENNLLMPLICEEGMTP
XP_008448206.1 PREDICTED: uncharacterized protein LOC103490467 [Cucumis melo]8.5e-4192.22Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWG+LIFGGYKFFTRGKG KDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
XP_022140380.1 uncharacterized protein LOC111011068 [Momordica charantia]3.5e-4292.47Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPK+NCW+DPMSPSKWKEEHFVIVSLSGWGLL FGGYKFFTRGKGKK+E  +
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
XP_023532872.1 uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]6.5e-4194.44Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
        MATLAAAAVRQARALTRVSSPQSTATLI RRGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFT GKGKKDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
XP_038900519.1 uncharacterized protein LOC120087716 [Benincasa hispida]4.5e-4296.67Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHG PK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL FGGYKFFTRGKGKKDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
TrEMBL top hitse value%identityAlignment
A0A1S3BJS2 uncharacterized protein LOC1034904674.1e-4192.22Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWG+LIFGGYKFFTRGKG KDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
A0A5A7U364 Uncharacterized protein1.4e-5285.71Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWIGFELFTR
        MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFV+VSLSGWGLLIFGGYKFFTRGKG KDE W+ FELFT 
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWIGFELFTR

Query:  LTSENNLLMPLICEEGMTP
         TS NNL +P I EEGM P
Subjt:  LTSENNLLMPLICEEGMTP
A0A6J1CEY6 uncharacterized protein LOC1110110681.7e-4292.47Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
        MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPK+NCW+DPMSPSKWKEEHFVIVSLSGWGLL FGGYKFFTRGKGKK+E  +
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
A0A6J1FYP0 uncharacterized protein LOC1114489074.6e-4089.25Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
        MATLAAAA RQARALTRVSSPQS ATLI RRGLAGAADHHGPPK+NCW DPMSPSKWKEEHFVIVSLSGWGLL FGGYKFFT GKGKKDE  +
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWI
A0A6J1I3K1 uncharacterized protein LOC1114695972.7e-4092.22Show/hide
Query:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
        MATLAA AVRQARALTR SSPQSTATLI RRGLAGAADHHGPPK+NCWQDPMSPSKWKEEHFVIVSLSGWGLL +GGYKFFT GKGKKDE
Subjt:  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein2.2e-1850.6Show/hide
Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGK
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  K++ W+ P +P  WKEEHFV++SLSGWGLL + GYK  T GK
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGK
AT2G20820.2 unknown protein2.7e-0842.62Show/hide
Query:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFV
        A+  R+A +L ++ S +     A++  RR LAGAADHHG  K++ W+ P +P  WKEEH++
Subjt:  AAAVRQARALTRVSSPQ---STATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACCGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCACCGAAGATTAACTGCTGGCAAGATCCAATGAGCCCATCTAAATGGAAGGAAGAGCATTTCGTGATTGTCTCTCTATCGGGATGGGGTCTACTCA
TCTTTGGAGGGTACAAATTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGTCATGGATCGGTTTTGAGTTGTTTACAAGATTAACTTCTGAGAACAATTTACTTATGCCT
CTTATTTGTGAGGAGGGAATGACACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACCGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGC
CGACCACCATGGACCACCGAAGATTAACTGCTGGCAAGATCCAATGAGCCCATCTAAATGGAAGGAAGAGCATTTCGTGATTGTCTCTCTATCGGGATGGGGTCTACTCA
TCTTTGGAGGGTACAAATTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGTCATGGATCGGTTTTGAGTTGTTTACAAGATTAACTTCTGAGAACAATTTACTTATGCCT
CTTATTTGTGAGGAGGGAATGACACCTTAA
Protein sequenceShow/hide protein sequence
MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDESWIGFELFTRLTSENNLLMP
LICEEGMTP