; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10000976 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000976
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionH/ACA ribonucleoprotein complex non-core subunit NAF1
Genome locationChr09:12652009..12653705
RNA-Seq ExpressionHG10000976
SyntenyHG10000976
Gene Ontology termsGO:0000493 - box H/ACA snoRNP assembly (biological process)
GO:0001522 - pseudouridine synthesis (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005732 - small nucleolar ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR007504 - H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038664 - H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
IPR040309 - H/ACA ribonucleoprotein complex non-core subunit Naf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459182.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X2 [Cucumis melo]2.5e-22987.82Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEA   GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF
        MSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG  SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGGPHFRGRRGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

XP_008466591.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo]1.2e-22886.75Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEAG  GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VLS++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRLAKRAMNDNQQIN N+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI EGR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF
        MSSFPP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NTFAGA+YPQGFVGP SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP T  GN APQQ NQNSSS QGRKS    RGRGGPHFRG RGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

XP_008466592.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X2 [Cucumis melo]1.2e-22886.75Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEAG  GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VLS++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRLAKRAMNDNQQIN N+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI EGR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF
        MSSFPP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NTFAGA+YPQGFVGP SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP T  GN APQQ NQNSSS QGRKS    RGRGGPHFRG RGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

XP_016902388.1 PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo]2.5e-22987.82Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEA   GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF
        MSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG  SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGGPHFRGRRGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

XP_031736890.1 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X2 [Cucumis sativus]3.1e-22784.89Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDL  D EDLDGE+EEAG  GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKKMQRLAKRAMNDNQQIN N+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KFG+ TFE ANVP+E +KFYGQ TPEQA I EGRKFD PTP QAKMDMV+ SPNQNQQTGPPLAPFVYHGGCPNPSVAEQCF+NGTG+
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQ---------------QVPQMPMPNTFAGASYPQGFVGP-SALPNPL
        MSSFPPTYNP FTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQ               Q+PQMPM NTFAGA+YPQGFVGP SALPN  
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQ---------------QVPQMPMPNTFAGASYPQGFVGP-SALPNPL

Query:  TSVEAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        T+V AQG+  GGLQFGQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGG HFRGRRGGRQ+R
Subjt:  TSVEAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

TrEMBL top hitse value%identityAlignment
A0A1S3CAT3 H/ACA ribonucleoprotein complex non-core subunit NAF11.2e-22987.82Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEA   GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF
        MSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG  SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGGPHFRGRRGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

A0A1S3CRT4 H/ACA ribonucleoprotein complex non-core subunit NAF16.0e-22986.75Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEAG  GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VLS++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRLAKRAMNDNQQIN N+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI EGR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF
        MSSFPP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NTFAGA+YPQGFVGP SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP T  GN APQQ NQNSSS QGRKS    RGRGGPHFRG RGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

A0A1S4E2D7 H/ACA ribonucleoprotein complex non-core subunit NAF11.2e-22987.82Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEA   GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF
        MSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG  SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGGPHFRGRRGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

A0A5A7TE26 H/ACA ribonucleoprotein complex non-core subunit NAF16.0e-22986.75Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEAG  GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VLS++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRLAKRAMNDNQQIN N+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI EGR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF
        MSSFPP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NTFAGA+YPQGFVGP SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGP-SALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP T  GN APQQ NQNSSS QGRKS    RGRGGPHFRG RGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

A0A5D3CIV9 H/ACA ribonucleoprotein complex non-core subunit NAF11.2e-22987.82Show/hide
Query:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV
        MVAWD+DGEDLD D EDLDGE+EEA   GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLV
Subjt:  MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLV

Query:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN
        DEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+N
Subjt:  DEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRN

Query:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV
        N RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGV
Subjt:  NVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGV

Query:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF
        MSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG  SALPN LT+V AQG+  GGLQF
Subjt:  MSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQF

Query:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR
        GQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+    GRGGPHFRGRRGG+Q+R
Subjt:  GQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHFRGRRGGRQTR

SwissProt top hitse value%identityAlignment
A6ZRW0 H/ACA ribonucleoprotein complex non-core subunit NAF12.3e-1527.62Show/hide
Query:  DSDGEDLDCDGED-----LDGEDEEAGVG-GGPITSKNEL--KVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGV--EKHNPLNEGSILWITEAR
        + D  D D +GED     ++ EDE+      GPI SKNE+  + +P +P  +  +     + P+G++ S   N +I+      +   L EGSI  + E R
Subjt:  DSDGEDLDCDGED-----LDGEDEEAGVG-GGPITSKNEL--KVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGV--EKHNPLNEGSILWITEAR

Query:  SPLGLVDEIFGPVKNPYYSVRY-----NSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQR-LAKR
        + +G++ E+FGP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ +++ EFSDDEKE  FKKM++   +R
Subjt:  SPLGLVDEIFGPVKNPYYSVRY-----NSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQR-LAKR

Query:  AMNDNQQINGNRNNVR-KKKNNAKAGKFGQCT---FETANVPNE---SRKFYGQRTPEQATIPEGRKFDQPTP------QQAKMDMVQQSPNQNQQTGPP
           DN+++  + +NV+ K+    KA    +       ++N P +     +   +    +++    R    P P      QQ   +        N    PP
Subjt:  AMNDNQQINGNRNNVR-KKKNNAKAGKFGQCT---FETANVPNE---SRKFYGQRTPEQATIPEGRKFDQPTP------QQAKMDMVQQSPNQNQQTGPP

Query:  LAPFVYHGGCPNP----SVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGL-PMNGM--PWLLQNPAQQVPQ
         +PF        P      A     + T    S PP YN       N   P +  F    Q  P  P G+ PMN M  P  +Q P Q  PQ
Subjt:  LAPFVYHGGCPNP----SVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGL-PMNGM--PWLLQNPAQQVPQ

O14360 H/ACA ribonucleoprotein complex non-core subunit NAF13.1e-1227.62Show/hide
Query:  DCDGEDLDGEDEEAGVGGGPITSKNELKVLPP--VPRVHASLQPHHQMLPVGIVLSIIGNQVIVEG-VEKHNPLNEGSILWITEARSPLGLVDEIFGPVK
        + D E+   E++       P T    +  LP     +    LQP+  + P+G ++ ++  +V+V+  ++    + +   +   E RS +G + E FGPV 
Subjt:  DCDGEDLDGEDEEAGVGGGPITSKNELKVLPP--VPRVHASLQPHHQMLPVGIVLSIIGNQVIVEG-VEKHNPLNEGSILWITEARSPLGLVDEIFGPVK

Query:  NPYYSVRYNSESEVPH-GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVS-DDDEFSDDEKELEF----KKMQRLAKRAMNDNQQINGNRNNV
        +PYY VR+++E E        G  V +V   A+ +      Y KG DAS V DEE++  + EFSDDE E+      KK +R AK  ++ NQ + G  N  
Subjt:  NPYYSVRYNSESEVPH-GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVS-DDDEFSDDEKELEF----KKMQRLAKRAMNDNQQINGNRNNV

Query:  RKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPS
           +NN +            N P     FY      Q + P  ++F Q  P  +   + + S N + Q     +P  Y+   P PS
Subjt:  RKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPS

P53919 H/ACA ribonucleoprotein complex non-core subunit NAF15.6e-1427.27Show/hide
Query:  DSDGEDLDCDGED-----LDGEDEEAGVG-GGPITSKNEL--KVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGV--EKHNPLNEGSILWITEAR
        + D  D D +GED     ++ EDE+      GPI SKNE+  + +P +P  +  +     + P+G++ S   N +I+      +   L EGSI  + E R
Subjt:  DSDGEDLDCDGED-----LDGEDEEAGVG-GGPITSKNEL--KVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGV--EKHNPLNEGSILWITEAR

Query:  SPLGLVDEIFGPVKNPYYSVRY-----NSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQRLAK-R
        + +G++ E+FGP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ +++ EFSDDEKE  FKKM++  + R
Subjt:  SPLGLVDEIFGPVKNPYYSVRY-----NSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQRLAK-R

Query:  AMNDNQQINGNRNNVR-KKKNNAKAGKFGQCT---FETANVPNE---SRKFYGQRTPEQATIPEGRKFDQPTP---QQAKMDMVQQSPNQNQQTGPPLAP
           DN+++  + +NV+ K+    KA    +       ++N P +     +   +    +++    R    P P      +       P   Q  G P  P
Subjt:  AMNDNQQINGNRNNVR-KKKNNAKAGKFGQCT---FETANVPNE---SRKFYGQRTPEQATIPEGRKFDQPTP---QQAKMDMVQQSPNQNQQTGPPLAP

Query:  FVYHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIR-PAEMPFQFQQQQNPFFPNGL-PMNGM--PWLLQNPAQQVPQ
        +       N       F   T    S    Y     PA N +  P +  F    Q  P  P G+ PMN M  P  +Q P Q  PQ
Subjt:  FVYHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIR-PAEMPFQFQQQQNPFFPNGL-PMNGM--PWLLQNPAQQVPQ

Q52KK4 H/ACA ribonucleoprotein complex non-core subunit NAF15.2e-1231.68Show/hide
Query:  SDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKV--LPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEI
        SDGE      ED+  E E       P+ +K+EL +  LP V  +  +L     + P+G V SII   VI+E +    P+NE ++++ ++ R   G + EI
Subjt:  SDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKV--LPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEI

Query:  FGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQRLAKRAMNDNQQINGN
        FGPV +P+Y +R+NS   +   GI     + F   + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE E K+ ++          QI G 
Subjt:  FGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQRLAKRAMNDNQQINGN

Query:  RNNVRKKKNNAKAGKFGQCTFE-TANVPNESRKFYGQRTPEQATIPEGR----KFDQPTPQQ
        +    K + N     FG+      AN  +E  K Y  R   +   P GR       +P PQQ
Subjt:  RNNVRKKKNNAKAGKFGQCTFE-TANVPNESRKFYGQRTPEQATIPEGR----KFDQPTPQQ

Q96HR8 H/ACA ribonucleoprotein complex non-core subunit NAF12.8e-1334.59Show/hide
Query:  SDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKV--LPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEI
        SDG+D      DL  E E       P+ +K+EL +  LP V  +   L    ++ P+G+V SII   VI+E +    P+NE ++++ ++ R   G + EI
Subjt:  SDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKV--LPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEI

Query:  FGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQR
        FGPV +P+Y +R+NS   +   GI     + F   + +F  Y+   K    KG DAS  ND+E   +  +FSDDEKE E K+ ++
Subjt:  FGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQR

Arabidopsis top hitse value%identityAlignment
AT1G03530.1 nuclear assembly factor 12.5e-6540.04Show/hide
Query:  DSDGEDLDCDGEDL-------DGEDEEAGV-GGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSP
        D D +D D D +D+       + ED++ G+    PI SKNELK LPPVP V  +L+PHH  LPVG+VLS++  QVIVEG+EKH+PL EGSILWITE R+P
Subjt:  DSDGEDLDCDGEDL-------DGEDEEAGV-GGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSP

Query:  LGLVDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQIN
        LGLVDEIFGPVK PYY VR+NSESEVP G+  GT VSFV +FA ++LN K+L KKGYDASG NDEE+ D+ EFSDDEKE E+++MQ+L KR M  +Q+  
Subjt:  LGLVDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQIN

Query:  GNRNNVRKKKN-----NAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLA----------PFVYH
          RN  +K ++     ++ +G++ +    ++   N S    G   P+    P      +P   Q     +   PNQ     P +A          P    
Subjt:  GNRNNVRKKKN-----NAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLA----------PFVYH

Query:  GGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPF----QFQQQQNP------FFPNGLPMNGMPWLLQNPAQQV-PQMPMPNTFAGASY
        G  P P         G G ++ FP   +  + PAM G       F      QQQ  P       F  GL M+     +  P  Q+ PQ  MP        
Subjt:  GGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPF----QFQQQQNP------FFPNGLPMNGMPWLLQNPAQQV-PQMPMPNTFAGASY

Query:  PQGFVGPSALPNPLTSVEAQGMQPGGLQFG-QNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHF-RGRRGGRQ
        PQ      +  NP   +  +   P   QF  Q Q++++P   Q   P S   +  P     Q F+   SS +GR  +GRGRGRG   F RGR  GRQ
Subjt:  PQGFVGPSALPNPLTSVEAQGMQPGGLQFG-QNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGRGGPHF-RGRRGGRQ

AT4G03380.1 BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1)5.2e-0738.1Show/hide
Query:  LPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPHGISGGTHVSFVLEFA
        +P G+V  +    ++V     H PLN G++L ITE + PLG VD   FG V NP Y V+  +SE ++P    GG   SF ++ +
Subjt:  LPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPHGISGGTHVSFVLEFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGTGGGATAGTGATGGTGAAGACCTCGATTGTGATGGTGAAGACCTCGACGGAGAAGACGAAGAGGCTGGGGTTGGAGGAGGGCCAATTACTTCTAAAAATGA
GCTTAAGGTTCTTCCTCCAGTTCCTCGAGTGCATGCGTCACTGCAGCCGCACCACCAAATGCTTCCTGTTGGAATTGTTTTGTCAATAATAGGCAATCAAGTCATTGTAG
AGGGTGTTGAGAAGCACAATCCTCTTAACGAAGGCTCTATCCTCTGGATAACTGAAGCTAGATCTCCATTGGGATTGGTAGATGAAATATTTGGACCGGTAAAAAATCCT
TACTATTCTGTAAGGTACAATTCTGAAAGTGAAGTTCCTCATGGAATTAGTGGTGGCACTCACGTCTCCTTCGTTCTTGAATTTGCCGATTATGTGCTAAATAACAAAGA
CCTGTACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGATGAGTTCTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGT
TAGCTAAGAGGGCTATGAATGACAACCAACAGATTAATGGGAACAGAAACAATGTTAGGAAGAAGAAAAACAACGCTAAAGCCGGGAAATTTGGTCAGTGTACATTTGAG
ACTGCAAATGTACCTAATGAGTCCAGGAAATTTTATGGCCAGCGCACACCCGAGCAAGCAACAATACCTGAAGGCAGGAAATTTGATCAGCCAACACCACAGCAAGCAAA
GATGGATATGGTTCAGCAATCCCCCAATCAAAACCAGCAGACTGGCCCTCCTTTAGCACCATTTGTATATCACGGTGGTTGTCCAAACCCTTCAGTTGCAGAACAATGTT
TTATCAATGGAACTGGTGTTATGTCTTCTTTTCCACCAACGTACAACCCCTACTTTACACCAGCAATGAATGGAATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAG
CAGCAGAATCCATTCTTTCCCAACGGTCTTCCAATGAATGGCATGCCTTGGCTATTACAGAATCCTGCACAGCAAGTGCCTCAAATGCCTATGCCGAATACATTTGCCGG
AGCATCGTATCCGCAGGGTTTCGTAGGTCCTTCTGCCCTACCTAATCCCTTGACAAGCGTAGAGGCACAAGGAATGCAACCCGGTGGACTACAGTTCGGACAGAATCAAA
ACAACTTGCAGCCTGCAACACAACAATTCAATCCCCCAAACTCGCACCCACCAGTTACATTTCCAGGAAACACAGCACCACAACAGTTTAACCAAAACTCATCTTCAAAC
CAGGGAAGGAAATCTTATGGTCGTGGTCGTGGTCGTGGTGGACCTCATTTTAGAGGTAGAAGAGGTGGGCGACAAACTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGTGGGATAGTGATGGTGAAGACCTCGATTGTGATGGTGAAGACCTCGACGGAGAAGACGAAGAGGCTGGGGTTGGAGGAGGGCCAATTACTTCTAAAAATGA
GCTTAAGGTTCTTCCTCCAGTTCCTCGAGTGCATGCGTCACTGCAGCCGCACCACCAAATGCTTCCTGTTGGAATTGTTTTGTCAATAATAGGCAATCAAGTCATTGTAG
AGGGTGTTGAGAAGCACAATCCTCTTAACGAAGGCTCTATCCTCTGGATAACTGAAGCTAGATCTCCATTGGGATTGGTAGATGAAATATTTGGACCGGTAAAAAATCCT
TACTATTCTGTAAGGTACAATTCTGAAAGTGAAGTTCCTCATGGAATTAGTGGTGGCACTCACGTCTCCTTCGTTCTTGAATTTGCCGATTATGTGCTAAATAACAAAGA
CCTGTACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGATGAGTTCTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGT
TAGCTAAGAGGGCTATGAATGACAACCAACAGATTAATGGGAACAGAAACAATGTTAGGAAGAAGAAAAACAACGCTAAAGCCGGGAAATTTGGTCAGTGTACATTTGAG
ACTGCAAATGTACCTAATGAGTCCAGGAAATTTTATGGCCAGCGCACACCCGAGCAAGCAACAATACCTGAAGGCAGGAAATTTGATCAGCCAACACCACAGCAAGCAAA
GATGGATATGGTTCAGCAATCCCCCAATCAAAACCAGCAGACTGGCCCTCCTTTAGCACCATTTGTATATCACGGTGGTTGTCCAAACCCTTCAGTTGCAGAACAATGTT
TTATCAATGGAACTGGTGTTATGTCTTCTTTTCCACCAACGTACAACCCCTACTTTACACCAGCAATGAATGGAATTAGGCCAGCAGAAATGCCATTTCAGTTTCAGCAG
CAGCAGAATCCATTCTTTCCCAACGGTCTTCCAATGAATGGCATGCCTTGGCTATTACAGAATCCTGCACAGCAAGTGCCTCAAATGCCTATGCCGAATACATTTGCCGG
AGCATCGTATCCGCAGGGTTTCGTAGGTCCTTCTGCCCTACCTAATCCCTTGACAAGCGTAGAGGCACAAGGAATGCAACCCGGTGGACTACAGTTCGGACAGAATCAAA
ACAACTTGCAGCCTGCAACACAACAATTCAATCCCCCAAACTCGCACCCACCAGTTACATTTCCAGGAAACACAGCACCACAACAGTTTAACCAAAACTCATCTTCAAAC
CAGGGAAGGAAATCTTATGGTCGTGGTCGTGGTCGTGGTGGACCTCATTTTAGAGGTAGAAGAGGTGGGCGACAAACTAGATGA
Protein sequenceShow/hide protein sequence
MVAWDSDGEDLDCDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNP
YYSVRYNSESEVPHGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFE
TANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQ
QQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVGPSALPNPLTSVEAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSN
QGRKSYGRGRGRGGPHFRGRRGGRQTR