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HG10000978 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10000978
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChromosome transmission fidelity protein
Genome locationChr09:12697943..12698149
RNA-Seq ExpressionHG10000978
SyntenyHG10000978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448201.1 PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo]1.4e-3298.53Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022140680.1 uncharacterized protein LOC111011282 [Momordica charantia]5.4e-3292.65Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VD+KR+VRRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022944461.1 uncharacterized protein LOC111448908 [Cucurbita moschata]4.9e-3395.59Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022986417.1 uncharacterized protein LOC111484159 [Cucurbita maxima]1.4e-3294.12Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKR+++RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_038902212.1 uncharacterized protein LOC120088840 [Benincasa hispida]7.5e-34100Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

TrEMBL top hitse value%identityAlignment
A0A1S3BJR8 uncharacterized protein LOC1034904656.9e-3398.53Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1CFS7 uncharacterized protein LOC1110112822.6e-3292.65Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VD+KR+VRRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1FUH3 uncharacterized protein LOC1114489082.4e-3395.59Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1J7G8 uncharacterized protein LOC1114841596.9e-3394.12Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKR+++RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6P6S4N3 uncharacterized protein LOC1136877978.4e-3188.24Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQ RKVRRS+PA GICSRCGGGASVADMKTATRFCHVPFYWK+WRA+ICTFCG++LRSYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein1.0e-2873.53Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQ RKV+RS+PA G CSRCG  AS+ADMKT+TRFC +P YW+SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT2G20835.1 unknown protein2.6e-2465.67Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY
        M  FCF+VDQ++KVR  +PA G+CSRCGGGA VADM+T+TRFC VPFY K+W+A++C  CG+VL+SY
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY

AT3G15534.1 unknown protein1.5e-2773.53Show/hide
Query:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKRKV+ S+PA G CSRCG GA VADMKT+TRFC +P Y +SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT4G29905.1 unknown protein3.0e-0436.54Show/hide
Query:  DQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC
        ++K ++ R + APG+C  CGG  S  D++T   FC +P  +K  R   C+ C
Subjt:  DQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGGTGCGGCGGAGGAGCCAGCGTAGCCGATATGAA
AACCGCCACTAGATTCTGTCACGTTCCCTTTTATTGGAAATCCTGGAGAGCACTCATTTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGGTGCGGCGGAGGAGCCAGCGTAGCCGATATGAA
AACCGCCACTAGATTCTGTCACGTTCCCTTTTATTGGAAATCCTGGAGAGCACTCATTTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAA
Protein sequenceShow/hide protein sequence
MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR