CuGenDBv2

Gene ID	HG10000994
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	lanC-like protein GCL2
Genome location	Chr09:12922659..12923033
RNA-Seq Expression	HG10000994
Synteny	HG10000994
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process)
InterPro domains	IPR012341 - Six-hairpin glycosidase-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570504.1 LanC-like protein GCL2, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-22

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

KAG7010366.1 LanC-like protein GCL2 [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-22

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

XP_022140440.1 lanC-like protein GCL2 [Momordica charantia]

9.6e-27

72.73

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ES  DSFLKDLSMPYPIISERFKR ALDLKE  V     V G R+ DFTLYSG LG   LLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

XP_022943721.1 lanC-like protein GCL2 isoform X1 [Cucurbita moschata]

1.9e-22

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

XP_022943723.1 lanC-like protein GCL2 isoform X2 [Cucurbita moschata]

1.9e-22

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CF36 lanC-like protein GCL2

4.6e-27

72.73

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ES  DSFLKDLSMPYPIISERFKR ALDLKE  V     V G R+ DFTLYSG LG   LLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

A0A6J1FSH6 lanC-like protein GCL2 isoform X1

9.0e-23

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

A0A6J1FXB1 lanC-like protein GCL2 isoform X2

9.0e-23

67.68

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISERFKR ALDLKE  V     V G R+ DFTLY+G LG  FLLLKAHEV SN+ DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

A0A6J1J9S1 lanC-like protein GCL2 isoform X2

5.9e-22

66.67

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISER KR ALDLKE  V     V G R+ DFTLYSG LG  FLLLKAHEV +N  DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

A0A6J1JCS6 lanC-like protein GCL2 isoform X1

5.9e-22

66.67

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FVP  ETAAA ESI       LSMPYPIISER KR ALDLKE  V     V G R+ DFTLYSG LG  FLLLKAHEV +N  DL LCAQIV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

SwissProt top hits

e value

%identity

Alignment

F4IEM5 LanC-like protein GCR2

2.8e-13

41.18

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Query:  MPNFVPEAETAAAAESI---EDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMA
        MP FVPE + +   E++   +DS  K LS+PY   SE+  R AL +K+  V       G R+ D+ LY+G LG  +LL K+++V  N +DL+LC + V A
Subjt:  MPNFVPEAETAAAAESI---EDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMA

Query:  CD
        CD
Subjt:  CD

Q8VZQ6 LanC-like protein GCL2

2.5e-17

47.47

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FV E E+ +  +++ +     L+MPY  +S++ KR ALDLKET V       G  + DFTLYSG LG  FLL +A++V  N NDL LC +IV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

Arabidopsis top hits

e value

%identity

Alignment

AT1G52920.1 G protein coupled receptor

2.0e-14

41.18

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Query:  MPNFVPEAETAAAAESI---EDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMA
        MP FVPE + +   E++   +DS  K LS+PY   SE+  R AL +K+  V       G R+ D+ LY+G LG  +LL K+++V  N +DL+LC + V A
Subjt:  MPNFVPEAETAAAAESI---EDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMA

Query:  CD
        CD
Subjt:  CD

AT2G20770.1 GCR2-like 2

1.7e-18

47.47

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Query:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD
        MP+FV E E+ +  +++ +     L+MPY  +S++ KR ALDLKET V       G  + DFTLYSG LG  FLL +A++V  N NDL LC +IV ACD
Subjt:  MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTV----RVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

AT5G65280.1 GCR2-like 1

1.1e-04

34.83

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Query:  DSFLKDLSMP-YPIISERFKREALDLKETTVRVI------------GPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMAC
        D  L + S P   + +E F R A  LK   V               GP + D T+Y+G LG  F  LK++EV  N+ DL  CA+I+  C
Subjt:  DSFLKDLSMP-YPIISERFKREALDLKETTVRVI------------GPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMAC

Sequences

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CDS sequence

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ATGCCAAACTTCGTACCAGAGGCAGAAACTGCAGCTGCTGCAGAATCAATTGAAGATTCTTTTCTAAAAGATCTCTCGATGCCATACCCAATTATCTCGGAGCGTTTTAA
ACGGGAAGCTTTGGACCTTAAAGAAACTACAGTAAGAGTAATTGGGCCACGTATGCATGATTTCACACTCTATTCTGGGCCTCTTGGAATGACTTTCTTGCTTTTAAAAG
CTCACGAGGTCCCTTCAAATAACAATGATCTTAGACTCTGCGCTCAAATTGTTATGGCTTGTGATTAA

mRNA sequence

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Protein sequence

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MPNFVPEAETAAAAESIEDSFLKDLSMPYPIISERFKREALDLKETTVRVIGPRMHDFTLYSGPLGMTFLLLKAHEVPSNNNDLRLCAQIVMACD

HG10000994 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome