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HG10001018 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001018
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr09:13287881..13288888
RNA-Seq ExpressionHG10001018
SyntenyHG10001018
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570308.1 hypothetical protein SDJN03_29223, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

XP_022944299.1 uncharacterized protein LOC111448786 isoform X1 [Cucurbita moschata]8.4e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

XP_022944300.1 uncharacterized protein LOC111448786 isoform X2 [Cucurbita moschata]8.4e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

XP_023512555.1 uncharacterized protein LOC111777262 isoform X2 [Cucurbita pepo subsp. pepo]8.4e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

XP_023512556.1 uncharacterized protein LOC111777262 isoform X3 [Cucurbita pepo subsp. pepo]8.4e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

TrEMBL top hitse value%identityAlignment
A0A6J1FVD5 uncharacterized protein LOC111448786 isoform X34.1e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

A0A6J1FWG5 uncharacterized protein LOC111448786 isoform X14.1e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

A0A6J1FYK8 uncharacterized protein LOC111448786 isoform X24.1e-1084.09Show/hide
Query:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        L   SHFGNGDN STSG DVSRSKLSRHFQVAD D TNLAGDKA
Subjt:  LDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

A0A6J1J8X1 uncharacterized protein LOC111483665 isoform X15.9e-0980.95Show/hide
Query:  QTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        + SHFGNGDN STSG DVSRSKLSRHFQVAD D TNL GD A
Subjt:  QTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

A0A6J1JDZ5 uncharacterized protein LOC111483665 isoform X95.9e-0980.95Show/hide
Query:  QTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA
        + SHFGNGDN STSG DVSRSKLSRHFQVAD D TNL GD A
Subjt:  QTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCAACTTCTAAGTTCCTCTTTTTGGCTAAGGATGGAGAGGAACACAAGCTCTTCAATAACAAAGTTAAATCTATTGGAGGGATTTTGGATCAGACCTCCCATTT
TGGTAATGGTGATAATGGTTCTACCTCTGGGCTAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCAGATAAGGATGAAACAAACTTGGCTGGTGATAAGG
CTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCAACTTCTAAGTTCCTCTTTTTGGCTAAGGATGGAGAGGAACACAAGCTCTTCAATAACAAAGTTAAATCTATTGGAGGGATTTTGGATCAGACCTCCCATTT
TGGTAATGGTGATAATGGTTCTACCTCTGGGCTAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCAGATAAGGATGAAACAAACTTGGCTGGTGATAAGG
CTTTTTGA
Protein sequenceShow/hide protein sequence
MVATSKFLFLAKDGEEHKLFNNKVKSIGGILDQTSHFGNGDNGSTSGLDVSRSKLSRHFQVADKDETNLAGDKAF