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HG10001027 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001027
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationChr09:13410656..13410835
RNA-Seq ExpressionHG10001027
SyntenyHG10001027
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR039281 - Arabinogalactan protein 3/12/13/14/21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570311.1 hypothetical protein SDJN03_29226, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1379.66Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKLFLV+++VAFA T A+ AAPSEAPAPAP SDAPLF PTFFASLSAL+ AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

KAG6605834.1 Arabinogalactan protein 14, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1173.33Show/hide
Query:  MESIKLKLFLVLM-MVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME++KLKLFLVL+ +VAFAGT+A++AAPSEAPAPAP SDAPL Y +FFASLS L+ A+FL
Subjt:  MESIKLKLFLVLM-MVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

XP_022944304.1 arabinogalactan peptide 13-like [Cucurbita moschata]2.6e-1481.36Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKLFLV+++VAFA T A+ AAPSEAPAPAP SDAPLFYPTFFASLSAL+ AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

XP_023513159.1 arabinogalactan peptide 14-like [Cucurbita pepo subsp. pepo]2.0e-1177.97Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKL LV+++VAFA T A+ AAPSEAPAPA  SDAPLFYPTFFASLSAL+ AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

XP_038902540.1 arabinogalactan protein 13-like [Benincasa hispida]5.2e-1584.75Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKLFLVL+++AFAGTIA+SA PSEAPAPAP SDA LFYPTFFASLSALL AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

TrEMBL top hitse value%identityAlignment
A0A2C9VZH4 Uncharacterized protein1.1e-0557.63Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME++K+ LF+VLM+V  A +  + AA + APAP+PTSDA +F PTFFASL AL   FFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

A0A2I4G052 arabinogalactan protein 13-like8.1e-0655.17Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF
        ME++KLKLF+ ++MV  A +  ++AA +EAPAP+PTS+A +F PTFFASL+AL    F
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF

A0A565B8P5 Uncharacterized protein2.4e-0555.93Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        MES+K+KL +VLM+   A +    AA +EAPAP+PTSDA +F P FFAS++AL S F L
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

A0A6J1FWG8 arabinogalactan peptide 13-like1.3e-1481.36Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKLFLV+++VAFA T A+ AAPSEAPAPAP SDAPLFYPTFFASLSAL+ AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

A0A6J1J5K6 arabinogalactan peptide 13-like1.3e-1481.36Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL
        ME+IKLKLFLV+++VAFA T A+ AAPSEAPAPAP SDAPLFYPTFFASLSAL+ AFFL
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL

SwissProt top hitse value%identityAlignment
Q9C8A4 Arabinogalactan protein 211.7e-0552.63Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        ME++K+K+ + +M+VA A + A +AA  EAPAP+PTSDA +F P  FAS+ AL S F
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

Q9LJD9 Arabinogalactan protein 122.1e-0653.45Show/hide
Query:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        MES+K+KL +VLM+   A   +   AA +EAPAP+PTSDA +F P  FAS++AL S F
Subjt:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

Q9LVC0 Arabinogalactan protein 141.7e-0545.76Show/hide
Query:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF
        ME++K+KL++V+++   A  T+ ++ A  +APAP+PTSDA  F PTFFAS++ +   FF
Subjt:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF

Q9STQ3 Arabinogalactan protein 131.7e-0547.37Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        ME++K++LF+ +++ A A +  + AA  EAPAP+PTSDA L  P FFAS++ L   F
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

Arabidopsis top hitse value%identityAlignment
AT1G55330.1 arabinogalactan protein 211.2e-0652.63Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        ME++K+K+ + +M+VA A + A +AA  EAPAP+PTSDA +F P  FAS+ AL S F
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

AT3G13520.1 arabinogalactan protein 121.5e-0753.45Show/hide
Query:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        MES+K+KL +VLM+   A   +   AA +EAPAP+PTSDA +F P  FAS++AL S F
Subjt:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

AT4G26320.1 arabinogalactan protein 131.2e-0647.37Show/hide
Query:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF
        ME++K++LF+ +++ A A +  + AA  EAPAP+PTSDA L  P FFAS++ L   F
Subjt:  MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAF

AT5G56540.1 arabinogalactan protein 141.2e-0645.76Show/hide
Query:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF
        ME++K+KL++V+++   A  T+ ++ A  +APAP+PTSDA  F PTFFAS++ +   FF
Subjt:  MESIKLKLFLVLMMVAFA-GTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCAATCAAGTTGAAGCTCTTCCTGGTGTTGATGATGGTGGCCTTCGCTGGCACCATTGCCAAATCTGCTGCTCCCTCTGAGGCTCCTGCTCCTGCTCCTACCTC
TGATGCTCCTCTCTTTTATCCCACTTTCTTTGCTTCTCTTTCTGCTCTTCTTTCTGCCTTCTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCAATCAAGTTGAAGCTCTTCCTGGTGTTGATGATGGTGGCCTTCGCTGGCACCATTGCCAAATCTGCTGCTCCCTCTGAGGCTCCTGCTCCTGCTCCTACCTC
TGATGCTCCTCTCTTTTATCCCACTTTCTTTGCTTCTCTTTCTGCTCTTCTTTCTGCCTTCTTCCTTTAA
Protein sequenceShow/hide protein sequence
MESIKLKLFLVLMMVAFAGTIAKSAAPSEAPAPAPTSDAPLFYPTFFASLSALLSAFFL