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HG10001113 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001113
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipoxygenase
Genome locationChr09:14105767..14105955
RNA-Seq ExpressionHG10001113
SyntenyHG10001113
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0034440 - lipid oxidation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016165 - linoleate 13S-lipoxygenase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041368.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]1.8e-1370.18Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRGVG++PY VLKP S  GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

KAA0041370.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]6.1e-1468.42Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F +F  +L++LEKTIDK N++ +LKNRRG G++PY VLKP S+HGVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

TYK21649.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]1.8e-1370.18Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRGVG++PY VLKP S  GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

XP_011653576.2 linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus]1.8e-1368.42Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRG G++PY VLKP S +GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

XP_016900757.1 PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]6.1e-1468.42Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F +F  +L++LEKTIDK N++ +LKNRRG G++PY VLKP S+HGVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

TrEMBL top hitse value%identityAlignment
A0A1S4DXN4 linoleate 13S-lipoxygenase 2-1, chloroplastic-like8.5e-1470.18Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRGVG++PY VLKP S  GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

A0A1S4DXQ4 linoleate 13S-lipoxygenase 2-1, chloroplastic-like2.9e-1468.42Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F +F  +L++LEKTIDK N++ +LKNRRG G++PY VLKP S+HGVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

A0A5A7TDJ5 Lipoxygenase2.9e-1468.42Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F +F  +L++LEKTIDK N++ +LKNRRG G++PY VLKP S+HGVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

A0A5A7TEK5 Lipoxygenase8.5e-1470.18Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRGVG++PY VLKP S  GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

A0A5D3DE91 Lipoxygenase8.5e-1470.18Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST
        F++F  KLD+LEKTID+ N++ +LKNRRGVG++PY VLKP S  GVTGKGVPYSVST
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST

SwissProt top hitse value%identityAlignment
O24370 Linoleate 13S-lipoxygenase 2-1, chloroplastic1.3e-1463.33Show/hide
Query:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        I   F  F  KL +LE  ID  N+D KL NR G GVMPY +LKPYSE GVTGKGVPYS+S
Subjt:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

P38418 Lipoxygenase 2, chloroplastic2.2e-1156.67Show/hide
Query:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        I   F +F  KL  LE  ID+ N +  LKNR G GV+ Y +LKP SEHGVTG GVPYS+S
Subjt:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

Q8GSM2 Lipoxygenase 2.3, chloroplastic1.9e-1046.67Show/hide
Query:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        ++  F +F  +L + E TID  N++ + KNR G G++PY +LKP+SE GVTG+G+P S+S
Subjt:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

Q9CAG3 Lipoxygenase 6, chloroplastic1.5e-1254.1Show/hide
Query:  QIRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        Q+  YFN+F  +L ++EKTI++ N D KLKNR G G+ PY +L P S HGVTG+G+P S+S
Subjt:  QIRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

R9WS04 Lipoxygenase 2, chloroplastic5.0e-1151.67Show/hide
Query:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        I+  F +F  +L +L+  ID  N D  L+NR G G++ Y +LKP+S HGVTGKGVPYS+S
Subjt:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 34.8e-0951.79Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        F  F A++ ++EK I+K N D   +NR G GV+PY +L P SE GVT +GVP SVS
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

AT1G55020.1 lipoxygenase 12.3e-1155.36Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        F +F  K+ ++EK ID+ NDD  LKNR G+  MPY +L P SE GVTG+G+P SVS
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein1.1e-1354.1Show/hide
Query:  QIRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        Q+  YFN+F  +L ++EKTI++ N D KLKNR G G+ PY +L P S HGVTG+G+P S+S
Subjt:  QIRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein1.3e-0951.79Show/hide
Query:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        F  F A++ ++EK IDK N D   +NR G GV+PY ++ P SE GVT +GVP SVS
Subjt:  FNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS

AT3G45140.1 lipoxygenase 21.6e-1256.67Show/hide
Query:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS
        I   F +F  KL  LE  ID+ N +  LKNR G GV+ Y +LKP SEHGVTG GVPYS+S
Subjt:  IRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAATAAGAGTTTACTTCAACCAGTTTCATGCGAAGTTGGATCAACTAGAAAAGACAATCGACAAGAATAATGACGATGGTAAGTTGAAAAATAGGAGAGGAGTTGGGGT
TATGCCTTATAATGTTCTGAAACCATATTCAGAACATGGAGTCACTGGAAAGGGAGTTCCATACAGCGTTTCCACTTAA
mRNA sequenceShow/hide mRNA sequence
CAAATAAGAGTTTACTTCAACCAGTTTCATGCGAAGTTGGATCAACTAGAAAAGACAATCGACAAGAATAATGACGATGGTAAGTTGAAAAATAGGAGAGGAGTTGGGGT
TATGCCTTATAATGTTCTGAAACCATATTCAGAACATGGAGTCACTGGAAAGGGAGTTCCATACAGCGTTTCCACTTAA
Protein sequenceShow/hide protein sequence
QIRVYFNQFHAKLDQLEKTIDKNNDDGKLKNRRGVGVMPYNVLKPYSEHGVTGKGVPYSVST