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HG10001123 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001123
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipoxygenase
Genome locationChr09:14218941..14219348
RNA-Seq ExpressionHG10001123
SyntenyHG10001123
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0046394 - carboxylic acid biosynthetic process (biological process)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041376.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]4.2e-2062.88Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT
        M KSQG  S  GVAP T L  +Q      R+I+   LVP  NNN+  L+K+   IKIKN  NNGGLRL+SG  G IKAALATATE  TSVIT+V+V KIT
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT

Query:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS
        GEITSSTI+KENQ A QK+L+L FASIL DPS
Subjt:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS

KAG6605891.1 Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1857.94Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKEIKIKNNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSSTI
        M KSQG    T VAPAT LC LQRP  R IN G   P  NN  N   K+     +NG LRLVS    IKAAL T  EP T+V+T+VIV KITGEITSST+
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKEIKIKNNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSSTI

Query:  VKENQAPQKLLKLEFASILLDPSNVL
        + E++A  KLLKLEFASIL+DP   L
Subjt:  VKENQAPQKLLKLEFASILLDPSNVL

XP_004142137.1 linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus]3.2e-2062.31Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKE---IKIKNN--NGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEI
        M KSQG  S  GVAP +          R I+   LVP  NNN+  L+K+   IKIKNN  NGGLR +SG GIIKAALATATE  TSVIT V V KITGEI
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKE---IKIKNN--NGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEI

Query:  TSSTIVKENQ--APQKLLKLEFASILLDPS
        TSSTIVKENQ  AP K L+L FASIL DPS
Subjt:  TSSTIVKENQ--APQKLLKLEFASILLDPS

XP_008449749.1 PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]4.2e-2062.88Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT
        M KSQG  S  GVAP T L  +Q      R+I+   LVP  NNN+  L+K+   IKIKN  NNGGLRL+SG  G IKAALATATE  TSVIT+V+V KIT
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT

Query:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS
        GEITSSTI+KENQ A QK+L+L FASIL DPS
Subjt:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS

XP_038901038.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]3.1e-3175.81Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKEIK-IK-NNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSS
        M KSQGF S T VAPAT LC LQRP G SIN G LV   NNNN  LEK++K IK   NGGLRLVSG GIIKAALATATEP T+VIT+VIV KITGEITSS
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKEIK-IK-NNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSS

Query:  TIVKENQAPQKLLKLEFASILLDP
         I+KENQAPQKLL+L FASILLDP
Subjt:  TIVKENQAPQKLLKLEFASILLDP

TrEMBL top hitse value%identityAlignment
A0A0A0L0L3 Uncharacterized protein1.6e-2062.31Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKE---IKIKNN--NGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEI
        M KSQG  S  GVAP +          R I+   LVP  NNN+  L+K+   IKIKNN  NGGLR +SG GIIKAALATATE  TSVIT V V KITGEI
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKE---IKIKNN--NGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEI

Query:  TSSTIVKENQ--APQKLLKLEFASILLDPS
        TSSTIVKENQ  AP K L+L FASIL DPS
Subjt:  TSSTIVKENQ--APQKLLKLEFASILLDPS

A0A1S3BMR0 Lipoxygenase2.0e-2062.88Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT
        M KSQG  S  GVAP T L  +Q      R+I+   LVP  NNN+  L+K+   IKIKN  NNGGLRL+SG  G IKAALATATE  TSVIT+V+V KIT
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT

Query:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS
        GEITSSTI+KENQ A QK+L+L FASIL DPS
Subjt:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS

A0A5A7TH45 Lipoxygenase2.0e-2062.88Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT
        M KSQG  S  GVAP T L  +Q      R+I+   LVP  NNN+  L+K+   IKIKN  NNGGLRL+SG  G IKAALATATE  TSVIT+V+V KIT
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT

Query:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS
        GEITSSTI+KENQ A QK+L+L FASIL DPS
Subjt:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS

A0A5D3DDW6 Lipoxygenase2.0e-2062.88Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT
        M KSQG  S  GVAP T L  +Q      R+I+   LVP  NNN+  L+K+   IKIKN  NNGGLRL+SG  G IKAALATATE  TSVIT+V+V KIT
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRPFG--RSINRGTLVPNGNNNNNLLEKE---IKIKN--NNGGLRLVSG-RGIIKAALATATEPITSVITRVIV-KIT

Query:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS
        GEITSSTI+KENQ A QK+L+L FASIL DPS
Subjt:  GEITSSTIVKENQ-APQKLLKLEFASILLDPS

A0A6J1H2B7 Lipoxygenase3.3e-1858.27Show/hide
Query:  MSKSQGFRSFTGVAPATGLCLLQRP-FGRSINRGTLVPNGNNNNNLLEKEIKIKNNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSST
        M KSQG    T VAPAT LC LQRP  GR IN G   P  NN  N   K+     +NG LRLVS    IKAAL T  EP T+V+T+VIV KITGEITSST
Subjt:  MSKSQGFRSFTGVAPATGLCLLQRP-FGRSINRGTLVPNGNNNNNLLEKEIKIKNNNGGLRLVSGRGIIKAALATATEPITSVITRVIV-KITGEITSST

Query:  IVKENQAPQKLLKLEFASILLDPSNVL
        ++ E++A  KLLKLEFASIL+DP   L
Subjt:  IVKENQAPQKLLKLEFASILLDPSNVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAATCTCAAGGCTTTAGATCTTTCACAGGGGTGGCTCCGGCAACCGGCCTCTGCCTTCTGCAGAGGCCGTTCGGTCGAAGCATCAACCGCGGTACTTTGGTTCC
TAATGGAAATAATAATAATAATCTCCTGGAGAAGGAGATTAAGATCAAGAATAATAATGGAGGGCTGAGATTAGTGTCCGGACGTGGAATAATCAAAGCAGCCTTAGCCA
CAGCCACGGAACCCATCACCAGTGTCATCACAAGAGTCATTGTGAAGATCACAGGAGAAATCACTTCATCTACAATTGTCAAAGAAAACCAAGCCCCTCAAAAGCTGCTC
AAGCTTGAGTTTGCCAGCATCCTCCTCGATCCTAGTAATGTTCTCTTCATATACCGATTATTTAAGAGAAATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAATCTCAAGGCTTTAGATCTTTCACAGGGGTGGCTCCGGCAACCGGCCTCTGCCTTCTGCAGAGGCCGTTCGGTCGAAGCATCAACCGCGGTACTTTGGTTCC
TAATGGAAATAATAATAATAATCTCCTGGAGAAGGAGATTAAGATCAAGAATAATAATGGAGGGCTGAGATTAGTGTCCGGACGTGGAATAATCAAAGCAGCCTTAGCCA
CAGCCACGGAACCCATCACCAGTGTCATCACAAGAGTCATTGTGAAGATCACAGGAGAAATCACTTCATCTACAATTGTCAAAGAAAACCAAGCCCCTCAAAAGCTGCTC
AAGCTTGAGTTTGCCAGCATCCTCCTCGATCCTAGTAATGTTCTCTTCATATACCGATTATTTAAGAGAAATGATTAG
Protein sequenceShow/hide protein sequence
MSKSQGFRSFTGVAPATGLCLLQRPFGRSINRGTLVPNGNNNNNLLEKEIKIKNNNGGLRLVSGRGIIKAALATATEPITSVITRVIVKITGEITSSTIVKENQAPQKLL
KLEFASILLDPSNVLFIYRLFKRND