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HG10001135 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001135
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipoxygenase
Genome locationChr09:14312387..14312605
RNA-Seq ExpressionHG10001135
SyntenyHG10001135
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041377.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]1.4e-1769.86Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNRH     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

TYK23948.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]6.8e-1768.49Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNR+     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

XP_004142235.2 linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X1 [Cucumis sativus]1.2e-1667.12Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LS HSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP L+NRH     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

XP_016900733.1 PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]1.4e-1769.86Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNRH     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

XP_038900841.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]5.6e-1984.48Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG
        +LSSHSP+EEYLGED++ AWAD GVIKEAF KFRAKLQKLEEIIDERN +PKLKNRHG
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG

TrEMBL top hitse value%identityAlignment
A0A1S4DXN0 Lipoxygenase6.6e-1869.86Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNRH     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

A0A5A7TIA3 Lipoxygenase6.6e-1869.86Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNRH     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

A0A5D3DKA2 Linoleate 13S-lipoxygenase 2-13.3e-1768.49Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE
        +LSSHSP+EEYLG DMEAAW D+ VIKEAF KFRAKLQ LE IIDERNANP LKNR+     G + ++ PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH-----GKFLIVFPFKE

A0A6J1D4V6 Lipoxygenase1.3e-1674.14Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG
        +LS+HSPEEEYLGEDME AW D  V+K+AF KF  +L+KLE+IID+RNANPKLKNRHG
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG

A0A6J1K0X9 Lipoxygenase1.6e-1666.67Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH----GKFLIVFPFKE
        +LSSHS +EEYLG DME AW D+ VIKEAF+KF  KL+KLEEIIDERN NPKLKNRH    G + I+ P+ E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRH----GKFLIVFPFKE

SwissProt top hitse value%identityAlignment
O24370 Linoleate 13S-lipoxygenase 2-1, chloroplastic9.9e-1155.17Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG
        +LS+HSP+EEY+GE +E  WA+  VI  AF+ F  KL++LE IID RN + KL NR+G
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG

O24371 Linoleate 13S-lipoxygenase 3-1, chloroplastic6.4e-1051.39Show/hide
Query:  LSSHSPEEEYLGE-DMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS
        LS+HSP+EEYLGE    + W     I EAF KF A++ ++E+ IDERNAN KLKNR G    V P++ L  S
Subjt:  LSSHSPEEEYLGE-DMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS

P38418 Lipoxygenase 2, chloroplastic1.2e-1354.69Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF
        +LS+HSP+EEY+GE  EA+WA++ VI  AF++F+ KLQ LE +IDERN N  LKNR G  ++ +
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF

Q8GSM2 Lipoxygenase 2.3, chloroplastic9.9e-1147.22Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF----PFKE
        +LSSHSP+EEY+GE  E AW  + ++K AF+KF  +L++ E  ID RN NP+ KNR G  ++ +    PF E
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF----PFKE

R9WS04 Lipoxygenase 2, chloroplastic3.1e-1251.56Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF
        +LSSHSP+EEY+G  MEA+W  +  IK AF++F  +L+KL++IID RN +P L+NR G  L+ +
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 34.7e-0841.67Show/hide
Query:  LSSHSPEEEYLGEDME-AAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS
        LS+HSP+EEY+GE  + + W     I EAF  F A++ ++E+ I++RNA+P  +NR G    V P++ L+ S
Subjt:  LSSHSPEEEYLGEDME-AAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS

AT1G55020.1 lipoxygenase 12.1e-0843.06Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS
        +LS+HS +E YLG+     WA +    EAF+KF  K++++E+ IDERN +  LKNR G  L+  P+  L  S
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein5.2e-0745.76Show/hide
Query:  LSSHSPEEEYLGE--DMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG
        LS+HSP+EEYL E  +++  W     + + F KF  +L K+E+ I+ERN + KLKNR G
Subjt:  LSSHSPEEEYLGE--DMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein3.0e-0743.1Show/hide
Query:  LSSHSPEEEYLGEDME-AAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG
        LS+HSP+EEY+GE  + + W     I +AF  F A++ ++E+ ID+RN +P  +NR G
Subjt:  LSSHSPEEEYLGEDME-AAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHG

AT3G45140.1 lipoxygenase 28.9e-1554.69Show/hide
Query:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF
        +LS+HSP+EEY+GE  EA+WA++ VI  AF++F+ KLQ LE +IDERN N  LKNR G  ++ +
Subjt:  MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGAGTCATTCTCCAGAAGAGGAGTATTTGGGAGAGGATATGGAAGCAGCATGGGCAGATAAGGGTGTTATAAAAGAAGCATTTCAAAAGTTTAGAGCAAAATT
ACAAAAATTGGAAGAGATTATCGATGAAAGGAATGCCAATCCTAAATTGAAAAACAGACATGGAAAGTTCCTAATAGTGTTTCCATTTAAAGAACTTCTACAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGAGTCATTCTCCAGAAGAGGAGTATTTGGGAGAGGATATGGAAGCAGCATGGGCAGATAAGGGTGTTATAAAAGAAGCATTTCAAAAGTTTAGAGCAAAATT
ACAAAAATTGGAAGAGATTATCGATGAAAGGAATGCCAATCCTAAATTGAAAAACAGACATGGAAAGTTCCTAATAGTGTTTCCATTTAAAGAACTTCTACAAAGTTAA
Protein sequenceShow/hide protein sequence
MLSSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQS