; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001167 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001167
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationChr09:14595252..14598217
RNA-Seq ExpressionHG10001167
SyntenyHG10001167
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449708.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]3.1e-17696.48Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

XP_008449711.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]2.3e-17195.01Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLEL     ACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

XP_011657641.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus]3.4e-17595.31Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQLESEPPNMQ TSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

XP_011657643.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus]2.5e-17093.84Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQLESEPPNMQ TSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLEL     ACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

XP_038901586.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida]5.4e-17395.31Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQLESEPPNMQ TS Y+EPWWRSIGYNHISPP AGGN+SNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ NCQ AVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPTVHGGC+TQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDS SGQAISSHSAGSSGSEAAPCALAETWNSS+GQQEARTQLHEAYEARSY N  SQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGEDGDCSGQQRSISENQA QRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KEL9 Nuclear transcription factor Y subunit1.6e-17595.31Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQLESEPPNMQ TSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

A0A1S3BNK4 Nuclear transcription factor Y subunit1.5e-17696.48Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

A0A1S4DXQ9 Nuclear transcription factor Y subunit1.1e-17195.01Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS
        MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVS
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVS

Query:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GCITQPPQLEL     ACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSY NGSSQFH+Y
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSY

Query:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAIK

A0A6J1FTP1 Nuclear transcription factor Y subunit4.3e-16893Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQDNCQHAV
        MQSK +SVNQLESEPPNMQ TSSYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASESNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+N QHAV
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQDNCQHAV

Query:  SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        SAAPTVHGGCITQPPQLELVGHSIACASN YQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHS
        RKPYLHESRHQHAMRRARGSGGRFAKKNE NS SSTMK+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSY NGS QFH+
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHS

Query:  YSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRLAIK
        YSSFQASSY LRSGERG+DGDCSGQQR SISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRLAIK

A0A6J1JHB5 Nuclear transcription factor Y subunit3.0e-16993.29Show/hide
Query:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQDNCQHAV
        MQSK +SVNQLESEPPNMQ TSSYSEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+NCQHAV
Subjt:  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQDNCQHAV

Query:  SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        SAAPTVHGGCITQPPQLELVGHSIACASN YQDPYYAG MAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHS
        RKPYLHESRHQHAMRRARGSGGRFAKKNE NS SST+K+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSY NGS QFH+
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHS

Query:  YSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRLAIK
        YSSFQASSY LRSGERG+DGDCSGQQR SISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.5e-2146.43Show/hide
Query:  HSIACASNPYQDPYYAGAMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
        +S+A    PY DPYY    A     +   +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG
Subjt:  HSIACASNPYQDPYYAGAMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG

Query:  SGGRF--AKKNEANSLSSTMKDKDS-GSGQAISSHSAGSS
         GGRF  AKK + +   S+ ++K +  +G++  + S+G+S
Subjt:  SGGRF--AKKNEANSLSSTMKDKDS-GSGQAISSHSAGSS

Q8VY64 Nuclear transcription factor Y subunit A-47.7e-2148.44Show/hide
Query:  PYQDPYYAGAMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY    A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYAGAMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  --AKKNEANSLSSTMKDKDSGSGQAISS
          AKK   +         D  + +A SS
Subjt:  --AKKNEANSLSSTMKDKDSGSGQAISS

Q945M9 Nuclear transcription factor Y subunit A-91.4e-4644.96Show/hide
Query:  MQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQH
        M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   D  Q 
Subjt:  MQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQH

Query:  AVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
              ++H G    PP  +LVGH++  A SNPYQDPYYAG M AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +G    S S+ +S          E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSS

Query:  QFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSISENQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-11.1e-5150Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH
        MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V ++   
Subjt:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH

Query:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A ++   H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS

Q9SYH4 Nuclear transcription factor Y subunit A-51.0e-2039.31Show/hide
Query:  GQVQDNCQHAVSAAPTVHGGCITQPPQLELVGHSIACAS----NPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRR
        G+  +N   +++ +  V    +   P    +  S+ CA     N +  P YA    A  H       +G+  +R+ LP  + + EP+FVNAKQY  ILRR
Subjt:  GQVQDNCQHAVSAAPTVHGGCITQPPQLELVGHSIACAS----NPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRR

Query:  RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQ--AISSHSAGS
        R+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    +    S+++      +GQ  ++S H  GS
Subjt:  RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQ--AISSHSAGS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A99.9e-4844.96Show/hide
Query:  MQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQH
        M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   D  Q 
Subjt:  MQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQH

Query:  AVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
              ++H G    PP  +LVGH++  A SNPYQDPYYAG M AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +G    S S+ +S          E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSS

Query:  QFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSISENQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A17.8e-5350Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH
        MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V ++   
Subjt:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH

Query:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A ++   H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS

AT5G12840.2 nuclear factor Y, subunit A17.1e-5449.82Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAV
        MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     DN  H +
Subjt:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAV

Query:  S------AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
               +   +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  S------AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS

AT5G12840.3 nuclear factor Y, subunit A17.8e-5350Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH
        MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V ++   
Subjt:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQDNCQH

Query:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A ++   H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPTV---HGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS

AT5G12840.4 nuclear factor Y, subunit A17.1e-5449.82Show/hide
Query:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAV
        MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     DN  H +
Subjt:  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAV

Query:  S------AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
               +   +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  S------AAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCATACTAGTAGTTATTCTGAACCTTGGTGGCGTAGCATTGGGTACAATCATAT
CTCCCCGCCAGCAGCAGGAGGAAATGTGTCAAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCCATGTCAAATGATGATTTAAATG
AAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAAGACAACTGTCAGCACGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATC
ACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGCGATGGCTGCCTACGGGCATCAACCGGG
TTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAA
GACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCTATGAGACGGGCCAGGGGTAGTGGT
GGACGATTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCTACTATGAAGGACAAGGACTCTGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTC
TGAAGCAGCGCCTTGTGCCCTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATGCGAACGGAA
GTAGCCAATTCCATAGTTACAGTAGCTTCCAAGCTTCTTCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAA
AATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCATACTAGTAGTTATTCTGAACCTTGGTGGCGTAGCATTGGGTACAATCATAT
CTCCCCGCCAGCAGCAGGAGGAAATGTGTCAAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCCATGTCAAATGATGATTTAAATG
AAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAAGACAACTGTCAGCACGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATC
ACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGCGATGGCTGCCTACGGGCATCAACCGGG
TTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAA
GACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCTATGAGACGGGCCAGGGGTAGTGGT
GGACGATTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCTACTATGAAGGACAAGGACTCTGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTC
TGAAGCAGCGCCTTGTGCCCTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATGCGAACGGAA
GTAGCCAATTCCATAGTTACAGTAGCTTCCAAGCTTCTTCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAA
AATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQDNCQHAVSAAPTVHGGCI
TQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSG
GRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISE
NQAAQRRLAIK