CuGenDBv2

Gene ID	HG10001168
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC110412324
Genome location	Chr09:14599312..14600219
RNA-Seq Expression	HG10001168
Synteny	HG10001168
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035867.1 hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-55

74.86

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL SLFNQN RPPL+ATKK S D L  +  H   + ASR CIV ++ETDSQQFEVDPDKARQALQELDQQLQSFSKK+ T PKKK VE  KLPR QMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEM E+S + LANSAV LFIFSIFYNVLFYAVIKPSID PLPSS+SS  E +STEP VLQ LP SS+FISPSLL+
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

XP_008449706.1 PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo]

1.1e-68

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL+S FNQNQRPP IATKKCSD VL  R FH FHYSAS   I+ ARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK V+D  LPRSQMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEMTEI G LLANSAV LFIFSIFYNVLFY VIKPSIDGPLPSS+SSDFE+EST PSVLQQLPLSS+ ISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

XP_011657640.1 uncharacterized protein LOC101220685 [Cucumis sativus]

3.3e-65

80.57

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL+SLFNQN RPP + TKKCSD VL  R FH  HYSAS   I+ A+E+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK V+D  +PRSQMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEMTEIS  LLANSAV LFIFSIFYNVLFY VIKPSID PLPSS+SSDFE+EST+PSVLQQLPLSS+ ISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

XP_022148727.1 uncharacterized protein LOC111017318 [Momordica charantia]

1.6e-56

76.4

Show/hide

Query:  MLSLRSLFNQNQ----RPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRS
        MLSL SLFNQNQ     PPL ATKKC   VL RRN H F  SA+R CIV ARE DSQQFE+DPDKARQALQELDQQLQSFSKKQVT PK K +D KLPR+
Subjt:  MLSLRSLFNQNQ----RPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRS

Query:  QMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        Q+RGEM+EISG+LLANSAV LFIFSI YNVLFY VIKPSIDGPL SS+SS  ERE TEP VLQQLPLSS FI  S LS
Subjt:  QMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

XP_038901592.1 uncharacterized protein LOC120088397 [Benincasa hispida]

1.8e-76

89.66

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRSQMRG
        MLSL+SLFNQNQRPPLIATKKCSDDVL RRNFH  HYSASR CI+ ARETDSQQFEVDPDKARQALQELDQQL+SFSKKQVTSPKKKV+D KLPRSQMRG
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRSQMRG

Query:  EMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        EMTEI+G +LANSAV LFIFSIFYNVLFY VIKPSIDGPLPSS+SSDFE+ESTEP VLQQLPLSSVFISPSLLS
Subjt:  EMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH36 Uncharacterized protein

1.6e-65

80.57

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL+SLFNQN RPP + TKKCSD VL  R FH  HYSAS   I+ A+E+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK V+D  +PRSQMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEMTEIS  LLANSAV LFIFSIFYNVLFY VIKPSID PLPSS+SSDFE+EST+PSVLQQLPLSS+ ISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

A0A1S3BNA1 uncharacterized protein LOC103491505

5.2e-69

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL+S FNQNQRPP IATKKCSD VL  R FH FHYSAS   I+ ARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK V+D  LPRSQMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEMTEI G LLANSAV LFIFSIFYNVLFY VIKPSIDGPLPSS+SSDFE+EST PSVLQQLPLSS+ ISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

A0A5D3BB07 Uncharacterized protein

5.2e-69

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL+S FNQNQRPP IATKKCSD VL  R FH FHYSAS   I+ ARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK V+D  LPRSQMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEMTEI G LLANSAV LFIFSIFYNVLFY VIKPSIDGPLPSS+SSDFE+EST PSVLQQLPLSS+ ISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

A0A6J1D5V3 uncharacterized protein LOC111017318

7.9e-57

76.4

Show/hide

Query:  MLSLRSLFNQNQ----RPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRS
        MLSL SLFNQNQ     PPL ATKKC   VL RRN H F  SA+R CIV ARE DSQQFE+DPDKARQALQELDQQLQSFSKKQVT PK K +D KLPR+
Subjt:  MLSLRSLFNQNQ----RPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRS

Query:  QMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        Q+RGEM+EISG+LLANSAV LFIFSI YNVLFY VIKPSIDGPL SS+SS  ERE TEP VLQQLPLSS FI  S LS
Subjt:  QMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

A0A6J1K5Q9 uncharacterized protein LOC111491401

1.5e-55

75.43

Show/hide

Query:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR
        MLSL SL NQN RPPL+ATKK S DVL  +  H F   ASR CIV ++ETDSQQFEVDPDKARQALQELDQQLQSFSKK+ T PKKK VE  KLPR QMR
Subjt:  MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VEDRKLPRSQMR

Query:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS
        GEM E+S + LANSAV LFIFSIFYNVLFYAVIKPSID PLPSS SS  E ++TEP VLQ LP SS+FISPSLLS
Subjt:  GEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01870.1 unknown protein

1.1e-10

39.2

Show/hide

Query:  IVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVED--RKLPRSQMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLP
        IV+A E +   F++D DKAR+AL++LDQQ++S + ++     K   D  R      M  E  EISG+ L +SA  L   ++FYN+LF  VIKPS+DG  P
Subjt:  IVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVED--RKLPRSQMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLP

Query:  SSVSSDFERESTEPSVLQQLPLSSV
         SV  +     ++  ++ + PLSS+
Subjt:  SSVSSDFERESTEPSVLQQLPLSSV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTTCCCTTCGGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTTTTGAGTAGAAGAAATTTCCACTCATTTCATTA
TTCTGCTTCTCGTTGTTGCATTGTGCGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTC
AATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGTTGAAGATAGGAAGCTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGGCCCTTTTA
GCAAATTCAGCTGTTGCTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATGCAGTCATAAAGCCTTCCATTGATGGTCCATTACCAAGTTCAGTCAGTTCTGA
CTTTGAGAGAGAATCTACTGAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTGTGTTCATATCCCCCTCACTTCTTAGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRSQMRGEMTEISGALL
ANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

HG10001168 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome