CuGenDBv2

Gene ID	HG10001214
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	axoneme-associated protein mst101(2)-like
Genome location	Chr09:15006837..15009526
RNA-Seq Expression	HG10001214
Synteny	HG10001214
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061754.1 uncharacterized protein E6C27_scaffold212G001320 [Cucumis melo var. makuwa]

8.9e-55

92.31

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+V QFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRNSGPSRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

XP_004140183.1 uncharacterized protein LOC101203308 [Cucumis sativus]

2.2e-53

90.77

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+VRQFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRN+G SRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM G GRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

XP_008449630.1 PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo]

3.0e-55

92.31

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+VRQFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRN+GPSRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

XP_038900589.1 uncharacterized protein LOC120087770 isoform X1 [Benincasa hispida]

2.2e-53

90.77

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHSNVRQFGGMA SSNSRRSLG+RKPEEQVLKSSEGFFKHGVLDVKHLL PASSRN+GP+RNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM  KGRRKGGKKK+ KSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

XP_038900590.1 uncharacterized protein LOC120087770 isoform X2 [Benincasa hispida]

1.5e-54

89.55

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Query:  FFMVQPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFR
        F ++QPQKKQRLPLSVARPIMKKQKEREQKMV+EHSNVRQFGGMA SSNSRRSLG+RKPEEQVLKSSEGFFKHGVLDVKHLL PASSRN+GP+RNSDPFR
Subjt:  FFMVQPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFR

Query:  NSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        N+DFGNEM  KGRRKGGKKK+ KSKKKGGGKKRH
Subjt:  NSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEY3 Uncharacterized protein

1.1e-53

90.77

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+VRQFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRN+G SRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM G GRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

A0A1S3BNE0 uncharacterized protein LOC103491457

1.5e-55

92.31

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+VRQFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRN+GPSRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

A0A5A7V3A9 Uncharacterized protein

4.3e-55

92.31

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EHS+V QFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLRP+SSRNSGPSRNSDPFRN+DF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKSKKKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

A0A6J1FZ06 uncharacterized protein LOC111449125

7.6e-44

81.54

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPIMKKQKEREQKMV+EH NV QFGG ASS++SR SLGKRKPE QVLKSSEGFFKHGVLDVKHLLRPA            P RNSDF
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKS KKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

A0A6J1JBZ2 uncharacterized protein LOC111483659

1.7e-43

80.77

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Query:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF
        +PQKKQRLPLSVARPI+KKQKEREQKMV+EH NV QFGGMASS++SR SLGKRKPE+QVLKSSEGFFKHGVLDVKHLLRPA            P RNSD 
Subjt:  QPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDF

Query:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH
        GNEM GKGRRKGGKKKNNKS KKGGGKKRH
Subjt:  GNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44820.1 unknown protein

1.2e-20

54.48

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLR--PASS-----RNSGPSRNSDPF
        QK  RLPLSVAR  MKKQK+RE+KM+E++  + +FGG  SSS  + +  KR PEE+VLKS+ G FK GVLDVKHLLR  P+SS     +   PSR     
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLR--PASS-----RNSGPSRNSDPF

Query:  RNSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKR
             G  +  KG++KGGK K NK KKKGGGKKR
Subjt:  RNSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKR

AT2G44820.2 unknown protein

1.2e-20

54.48

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLR--PASS-----RNSGPSRNSDPF
        QK  RLPLSVAR  MKKQK+RE+KM+E++  + +FGG  SSS  + +  KR PEE+VLKS+ G FK GVLDVKHLLR  P+SS     +   PSR     
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLR--PASS-----RNSGPSRNSDPF

Query:  RNSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKR
             G  +  KG++KGGK K NK KKKGGGKKR
Subjt:  RNSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKR

Sequences

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CDS sequence

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ATGTTTGGAAATACTTGGATTTATATTTGGTCGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATCGAGAGTAGAAAATTTGTTTCTCTGGGTGGAAAGACCATC
GATCTTCTTTTTCATGGTGCAGCCTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTAGAAGAGC
ATTCGAATGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCTAGAAGATCTTTGGGGAAGCGCAAGCCGGAGGAGCAGGTTCTTAAGTCGAGTGAAGGCTTTTTT
AAACATGGTGTGCTTGATGTCAAGCATCTACTACGTCCAGCCTCTTCTAGGAATAGTGGCCCTTCTAGGAATAGTGACCCTTTTAGGAATAGTGACTTTGGAAATGAAAT
GGTCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGA

mRNA sequence

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Protein sequence

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MFGNTWIYIWSPPLICHGKTKRRSRVENLFLWVERPSIFFFMVQPQKKQRLPLSVARPIMKKQKEREQKMVEEHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFF
KHGVLDVKHLLRPASSRNSGPSRNSDPFRNSDFGNEMVGKGRRKGGKKKNNKSKKKGGGKKRH

HG10001214 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome