; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001248 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001248
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr09:15387305..15388102
RNA-Seq ExpressionHG10001248
SyntenyHG10001248
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]7.5e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]5.8e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN+L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]7.5e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]4.3e-14192.08Show/hide
Query:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF
        M I IRQVWDFNLDYEFNLIN+L HRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTD  FIWEFNFRDF
Subjt:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF

Query:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR
        D+ RD HAPDSI+LLKRQGIDFERN+ HGV SSRFA+LLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTR+KLPARLHDFLK+LR  FGNKVYDVKHMMR
Subjt:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        FCDGLYGGLDRVAKTLAVDRAVGK HQAGSDSLLTWQAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

TrEMBL top hitse value%identityAlignment
A0A0A0KI60 Poly(A)-specific ribonuclease2.9e-12782.26Show/hide
Query:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF
        MLI  RQVWD NL +EFNLI  LLHR+PFIS+DTEFPGV+IRP LHR  LRPSDHYLLLKSNVDALNLIQ+GLTLSDA+GNLPTLGT  +FIWEFNFRDF
Subjt:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF

Query:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR
        D+ARDPHAPDSI+LLK+QGIDF RN+ HGVCSSRFA L+MSSGLLCNDS+TWVTFHSAYDFGYLVKILTR+KLP+RL DFL +L+  FG KVYDVKHMMR
Subjt:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        FCDGLYGGLDR+AKTL +DRAVGK HQAGSDSLLT+QAF+KM DVYF KDGP+KHAGVL+GLE+Y
Subjt:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

A0A1S3BNU2 Poly(A)-specific ribonuclease7.1e-12682.69Show/hide
Query:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDLARD
        RQVWD NL +EFNLI  LLHR+PFIS+DTEFPGV+IRP LHR  L PSDHYLLLKSNVDALNLIQ+GLTLSDA+GNLPTLGT  +FIWEFNFRDFD+AR 
Subjt:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDLARD

Query:  PHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCDGL
        PH P SI+LLK+QGIDF RN+ HGVCSS+FA LLMSSGLLCN+S+TWVTFHSAYDFGYLVKILTR+KLP+RLHDFL +L   FGNKVYDVKHMMRFCDGL
Subjt:  PHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCDGL

Query:  YGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        YGGLDRVAKTL ++RAVGK HQAGSDSLLTWQAF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  YGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

A0A5D3B887 Poly(A)-specific ribonuclease3.8e-12782.26Show/hide
Query:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF
        MLI  RQVWD NL +EFNLI  LLHR+PFIS+DTEFPGV+IRP LHR  L PSDHYLLLKSNVDALNLIQ+GLTLSDA+GNLPTLGT  +FIWEFNFRDF
Subjt:  MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDF

Query:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR
        D+AR PH P SI+LLK+QGIDF RN+ HGVCSS+FA LLMSSGLLCN+S+TWVTFHSAYDFGYLVKILTR+KLP+RLHDFL +L   FGNKVYDVKHMMR
Subjt:  DLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        FCDGLYGGLDRVAKTL ++RAVGK HQAGSDSLLTWQAF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  FCDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

A0A6J1GZY2 Poly(A)-specific ribonuclease3.6e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

A0A6J1K4S7 Poly(A)-specific ribonuclease2.8e-13085.55Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        IH+R+VWDFNL +EF LIN+L+ R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDA+GNLPTLGTDK FIWEFNFRDFD+
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
         RD HAPDSIDLLKRQGIDFERN+AHGV S+RF++LLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLK+L+ FFGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGKCHQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 117.1e-10770.52Show/hide
Query:  LIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALH-RPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKT--FIWEFNFR
        +I IR VW +NL+ EF+LI  ++  +PFISMDTEFPGV+ +  L    R  P+  Y LLKSNVDAL+LIQVGLTLSDA+GNLP LG  K   +IWEFNFR
Subjt:  LIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALH-RPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKT--FIWEFNFR

Query:  DFDLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHM
        DFD+ RDPHAPDSI+LL+R GIDFERN+  GV S RFA+L+MSSGL+CN+SV+WVTFHSAYDFGYLVKILTR +LP  L +FL +LR FFG++VYDVKH+
Subjt:  DFDLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        MRFC+  LYGGLDRVA++L V+RAVGKCHQAGSDSLLTWQAFQ+MRD+YF++DG EKHAGVLYGLEV+
Subjt:  MRFCD-GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.1e-7854.96Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        I IR+VWD+NL  EF LI  ++ +F +I+MDTEFPGVV++P +   +     +Y  LK NVD L LIQVGLT SD NGNLPT GTDK  IW+FNFR+F++
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
          D +A +SI+LL++ GIDF++N   G+   RF +L+MSSG++ ND+++WVTFH  YDFGYLVK+LT  +LP +  DF K+L V+F   VYD+KH+M FC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        +GL+GGL+R+A+ + V+R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.0e-10570.34Show/hide
Query:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTD--KTFIWEFNFRDFDLA
        R+VW  NL+ EF LI+ ++  +PFISMDTEFPGV+ +  L      P D Y LLK+NVDAL+LIQVGLTLSD NGNLP LG D  + FIWEFNFRDFD+A
Subjt:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTD--KTFIWEFNFRDFDLA

Query:  RDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCD
        RD HAPDSI+LL+RQGIDFERN   GV S RFA+L+MSSGL+CN+ V+WVTFHSAYDFGYL+KILTR +LP  L +F +V+RV FG +VYDVKHMM+FC+
Subjt:  RDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCD

Query:  -GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
          L+GGLDRVA+TL V+RAVGKCHQAGSDSLLTW AFQ+MRD+YF++DGPEKHAGVLYGLEV+
Subjt:  -GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.1e-7553.99Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        I IR+VW+ NL  E +LI +++  FP+++MDTEFPG+V+RP +   +     HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FDL
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
          D  A DSI+LLK+ GID  +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    DF K++ V+F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        + L+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 77.2e-7553.23Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTF-IWEFNFRDFD
        I IR+VW+ NL+ E  LI  ++  FPF++MDTEFPG+V RP +   +     HY  LK+NV+ L +IQ+GLT SD  GNLPT GTD  + IW+FNFR+FD
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTF-IWEFNFRDFD

Query:  LARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRF
        L  D +A DSI+LL++ GIDF +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP     F +++ V+F  +VYD+KH+M+F
Subjt:  LARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRF

Query:  CDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        C+ L+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F+    EK++GVLYGL V
Subjt:  CDGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.9e-7753.99Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        I IR+VW+ NL  E +LI +++  FP+++MDTEFPG+V+RP +   +     HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FDL
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
          D  A DSI+LLK+ GID  +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    DF K++ V+F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        + L+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.9e-7753.99Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        I IR+VW+ NL  E +LI +++  FP+++MDTEFPG+V+RP +   +     HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FDL
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
          D  A DSI+LLK+ GID  +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    DF K++ V+F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        + L+GGL+++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-10770.34Show/hide
Query:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTD--KTFIWEFNFRDFDLA
        R+VW  NL+ EF LI+ ++  +PFISMDTEFPGV+ +  L      P D Y LLK+NVDAL+LIQVGLTLSD NGNLP LG D  + FIWEFNFRDFD+A
Subjt:  RQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTD--KTFIWEFNFRDFDLA

Query:  RDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCD
        RD HAPDSI+LL+RQGIDFERN   GV S RFA+L+MSSGL+CN+ V+WVTFHSAYDFGYL+KILTR +LP  L +F +V+RV FG +VYDVKHMM+FC+
Subjt:  RDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCD

Query:  -GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
          L+GGLDRVA+TL V+RAVGKCHQAGSDSLLTW AFQ+MRD+YF++DGPEKHAGVLYGLEV+
Subjt:  -GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-7954.96Show/hide
Query:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL
        I IR+VWD+NL  EF LI  ++ +F +I+MDTEFPGVV++P +   +     +Y  LK NVD L LIQVGLT SD NGNLPT GTDK  IW+FNFR+F++
Subjt:  IHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDL

Query:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC
          D +A +SI+LL++ GIDF++N   G+   RF +L+MSSG++ ND+++WVTFH  YDFGYLVK+LT  +LP +  DF K+L V+F   VYD+KH+M FC
Subjt:  ARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        +GL+GGL+R+A+ + V+R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  DGLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-10870.52Show/hide
Query:  LIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALH-RPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKT--FIWEFNFR
        +I IR VW +NL+ EF+LI  ++  +PFISMDTEFPGV+ +  L    R  P+  Y LLKSNVDAL+LIQVGLTLSDA+GNLP LG  K   +IWEFNFR
Subjt:  LIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALH-RPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKT--FIWEFNFR

Query:  DFDLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHM
        DFD+ RDPHAPDSI+LL+R GIDFERN+  GV S RFA+L+MSSGL+CN+SV+WVTFHSAYDFGYLVKILTR +LP  L +FL +LR FFG++VYDVKH+
Subjt:  DFDLARDPHAPDSIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY
        MRFC+  LYGGLDRVA++L V+RAVGKCHQAGSDSLLTWQAFQ+MRD+YF++DG EKHAGVLYGLEV+
Subjt:  MRFCD-GLYGGLDRVAKTLAVDRAVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCCACATCCGTCAGGTTTGGGATTTCAATCTCGACTACGAATTCAATCTCATCAATAACCTCCTCCATCGATTCCCTTTCATCTCTATGGACACTGAATTCCC
CGGCGTCGTCATCCGCCCCGCCCTCCACCGTCCCCGTCTCCGCCCCTCCGATCACTACCTTCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAAGTCGGCCTCA
CTCTCTCCGACGCCAACGGCAACCTCCCCACACTCGGCACCGACAAAACCTTCATTTGGGAATTCAATTTTAGGGATTTCGACCTCGCGCGTGACCCTCACGCGCCCGAC
TCCATTGATCTCTTGAAACGCCAGGGCATCGATTTCGAGCGCAACAAAGCTCACGGGGTTTGTTCTTCCCGGTTCGCCCAGTTGCTGATGTCATCCGGTCTTCTCTGTAA
CGACTCGGTCACTTGGGTTACCTTCCATAGTGCTTATGACTTTGGCTACTTGGTTAAGATCCTCACTCGGTCCAAACTGCCCGCCCGCCTCCATGACTTCTTGAAAGTTC
TCAGGGTCTTCTTCGGGAACAAGGTTTATGACGTCAAGCATATGATGCGGTTCTGTGATGGTCTTTACGGCGGCTTGGACCGGGTCGCTAAGACGCTTGCGGTGGACCGG
GCGGTTGGTAAATGCCACCAGGCCGGTTCTGATAGCTTGCTCACGTGGCAAGCTTTTCAGAAGATGAGAGATGTTTATTTTTTAAAAGATGGGCCGGAGAAGCACGCCGG
TGTCTTGTATGGATTAGAAGTGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCCACATCCGTCAGGTTTGGGATTTCAATCTCGACTACGAATTCAATCTCATCAATAACCTCCTCCATCGATTCCCTTTCATCTCTATGGACACTGAATTCCC
CGGCGTCGTCATCCGCCCCGCCCTCCACCGTCCCCGTCTCCGCCCCTCCGATCACTACCTTCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAAGTCGGCCTCA
CTCTCTCCGACGCCAACGGCAACCTCCCCACACTCGGCACCGACAAAACCTTCATTTGGGAATTCAATTTTAGGGATTTCGACCTCGCGCGTGACCCTCACGCGCCCGAC
TCCATTGATCTCTTGAAACGCCAGGGCATCGATTTCGAGCGCAACAAAGCTCACGGGGTTTGTTCTTCCCGGTTCGCCCAGTTGCTGATGTCATCCGGTCTTCTCTGTAA
CGACTCGGTCACTTGGGTTACCTTCCATAGTGCTTATGACTTTGGCTACTTGGTTAAGATCCTCACTCGGTCCAAACTGCCCGCCCGCCTCCATGACTTCTTGAAAGTTC
TCAGGGTCTTCTTCGGGAACAAGGTTTATGACGTCAAGCATATGATGCGGTTCTGTGATGGTCTTTACGGCGGCTTGGACCGGGTCGCTAAGACGCTTGCGGTGGACCGG
GCGGTTGGTAAATGCCACCAGGCCGGTTCTGATAGCTTGCTCACGTGGCAAGCTTTTCAGAAGATGAGAGATGTTTATTTTTTAAAAGATGGGCCGGAGAAGCACGCCGG
TGTCTTGTATGGATTAGAAGTGTATTAA
Protein sequenceShow/hide protein sequence
MLIHIRQVWDFNLDYEFNLINNLLHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLKSNVDALNLIQVGLTLSDANGNLPTLGTDKTFIWEFNFRDFDLARDPHAPD
SIDLLKRQGIDFERNKAHGVCSSRFAQLLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRSKLPARLHDFLKVLRVFFGNKVYDVKHMMRFCDGLYGGLDRVAKTLAVDR
AVGKCHQAGSDSLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVY