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HG10001250 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001250
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNAC domain-containing protein 40
Genome locationChr09:15412684..15415285
RNA-Seq ExpressionHG10001250
SyntenyHG10001250
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010338.1 hypothetical protein SDJN02_27131, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1596.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
XP_016900731.1 PREDICTED: NAC domain-containing protein 40 [Cucumis melo]1.0e-1498.11Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK QQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
XP_022944563.1 uncharacterized protein LOC111448980 [Cucurbita moschata]4.5e-1596.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
XP_023512164.1 uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo]2.9e-1494.23Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEW+QQLVPEV T VNSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
XP_038902642.1 uncharacterized protein LOC120089290 [Benincasa hispida]3.5e-1596.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVD T+NSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
TrEMBL top hitse value%identityAlignment
A0A0A0KEF2 Uncharacterized protein1.4e-1496.23Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVD+TVNSQK QQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
A0A1S4DXM3 NAC domain-containing protein 404.9e-1598.11Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK QQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
A0A5A7V382 NAC domain-containing protein 404.9e-1598.11Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK QQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQK-QQQISTREEAVKEK
A0A6J1FY60 uncharacterized protein LOC1114489802.2e-1596.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
A0A6J1J9H8 uncharacterized protein LOC1114838102.2e-1596.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQKQQQISTREEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G44280.1 unknown protein2.7e-1075.47Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDT-TVNSQKQQQISTREEAVKEK
        MS+ +LLV L VILI+TSQFEWRQ LV E+DT T +SQKQQQIS REEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDT-TVNSQKQQQISTREEAVKEK
AT5G22280.1 unknown protein6.7e-0967.92Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVN-SQKQQQISTREEAVKEK
        MSR ++LVFL VILI+TSQFEWRQ L+ E+D   + SQK QQI+ REEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVN-SQKQQQISTREEAVKEK
AT5G22280.3 unknown protein6.7e-0967.92Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVN-SQKQQQISTREEAVKEK
        MSR ++LVFL VILI+TSQFEWRQ L+ E+D   + SQK QQI+ REEAVKEK
Subjt:  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVN-SQKQQQISTREEAVKEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGATCCATGTTACTTGTCTTTTTGTTCGTTATTCTCATTATCACTTCGCAGTTCGAGTGGAGGCAACAACTAGTACCTGAGGTTGATACCACGGTAAACTCCCA
GAAGCAGCAGCAGATATCAACGAGGGAGGAAGCAGTTAAGGAGAAGTCATTTTACACATATTGGATTGAATTGGTGTGTAGATATTGTTGTCACAAGAAAGGAATATCCA
AAGGCTCAATGAAGTTGTGCGAAGCCTCCGGGAACAGTTGCAGCAGTGCAGAAGCAGGAACATTACAAATGGGACAGGCCTACGAAATGGACATATTCTTGAGCTCGAAC
GACATCATGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGATCCATGTTACTTGTCTTTTTGTTCGTTATTCTCATTATCACTTCGCAGTTCGAGTGGAGGCAACAACTAGTACCTGAGGTTGATACCACGGTAAACTCCCA
GAAGCAGCAGCAGATATCAACGAGGGAGGAAGCAGTTAAGGAGAAGTCATTTTACACATATTGGATTGAATTGGTGTGTAGATATTGTTGTCACAAGAAAGGAATATCCA
AAGGCTCAATGAAGTTGTGCGAAGCCTCCGGGAACAGTTGCAGCAGTGCAGAAGCAGGAACATTACAAATGGGACAGGCCTACGAAATGGACATATTCTTGAGCTCGAAC
GACATCATGTATTAG
Protein sequenceShow/hide protein sequence
MSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQISTREEAVKEKSFYTYWIELVCRYCCHKKGISKGSMKLCEASGNSCSSAEAGTLQMGQAYEMDIFLSSN
DIMY