; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001347 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001347
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSNF1-related protein kinase regulatory subunit beta-3
Genome locationChr09:16265285..16265727
RNA-Seq ExpressionHG10001347
SyntenyHG10001347
Gene Ontology termsGO:0009744 - response to sucrose (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0043562 - cellular response to nitrogen levels (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR006828 - Association with the SNF1 complex (ASC) domain
IPR030067 - SNF1-related protein kinase regulatory subunit beta-3
IPR037256 - ASC domain superfamily
IPR043554 - SNF1-related protein kinase regulatory subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145755.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus]4.0e-5997.44Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNLYSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDPPLVPPHLQHTLLSQPASRDAG TLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

XP_022140750.1 SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia]1.7e-5490.6Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN YSEDSDQTTVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRDAGGTLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

XP_022958406.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata]2.7e-5593.04Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN + EDSDQTTVVGFEVPKSPDSTYNNVY+GSED+ARDPP VPPHLQHTLLS PASRDAGGTLPLPQNV+LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

XP_022996167.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima]7.8e-5592.17Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN + EDSDQTTVVGFEVPKSPDSTYNNVY+GSED+ARDPP VPPHLQHTLLS PA RDAGGTLPLPQNV+LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

XP_038902942.1 SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida]1.3e-5796.58Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNL SEDSDQ TVVGFEVPKSPDSTYNNVY+GSEDEARDPPLVPPHLQHTLLSQPASRDAG TLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

TrEMBL top hitse value%identityAlignment
A0A0A0KBG3 AMPKBI domain-containing protein1.9e-5997.44Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNLYSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDPPLVPPHLQHTLLSQPASRDAG TLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A1S3CP39 SNF1-related protein kinase regulatory subunit beta-31.9e-5997.44Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNLYSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDPPLVPPHLQHTLLSQPASRDAG TLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A5A7T1A3 SNF1-related protein kinase regulatory subunit beta-3 isoform X21.9e-5997.44Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNLYSEDSDQTTVVGFEVPKSPDSTYNN+Y+GSEDEARDPPLVPPHLQHTLLSQPASRDAG TLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A6J1H1Z8 SNF1-related protein kinase regulatory subunit beta-3-like1.3e-5593.04Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN + EDSDQTTVVGFEVPKSPDSTYNNVY+GSED+ARDPP VPPHLQHTLLS PASRDAGGTLPLPQNV+LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

A0A6J1KA31 SNF1-related protein kinase regulatory subunit beta-3-like3.8e-5592.17Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN + EDSDQTTVVGFEVPKSPDSTYNNVY+GSED+ARDPP VPPHLQHTLLS PA RDAGGTLPLPQNV+LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

SwissProt top hitse value%identityAlignment
Q6PAM0 5'-AMP-activated protein kinase subunit beta-21.8e-0936.84Show/hide
Query:  EVPKSPDSTY-NNVYI-GSEDEARDPPLVPPHLQHTLLSQPASRDAG-GTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV
        ++  SP   Y   +Y+  SE+  + PP++PPHL   +L++  +       LP P +V+LNHL+  + +   SV+ L  THR+  KYVT +LYKP+
Subjt:  EVPKSPDSTY-NNVYI-GSEDEARDPPLVPPHLQHTLLSQPASRDAG-GTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV

Q84VQ1 SNF1-related protein kinase regulatory subunit beta-11.7e-2050.51Show/hide
Query:  TVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR
        ++V FE P SPD +Y      +ED A++P  VPP L  TLL    + +       PQ+V+LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Subjt:  TVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR

Q9QZH4 5'-AMP-activated protein kinase subunit beta-24.7e-1037.89Show/hide
Query:  EVPKSPDSTY-NNVYI-GSEDEARDPPLVPPHLQHTLLSQPASRDAG-GTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV
        ++  SP   Y   +Y+  SE+  + PP++PPHL   +L++  +       LP P +V+LNHL+     T  SV+ L  THR+  KYVT +LYKP+
Subjt:  EVPKSPDSTY-NNVYI-GSEDEARDPPLVPPHLQHTLLSQPASRDAG-GTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV

Q9SCY5 SNF1-related protein kinase regulatory subunit beta-21.8e-2554.37Show/hide
Query:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP+++Y+N+ +G+ED +++PP+VPPHLQ TLL+ PA+  D    LP PQ+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

Q9ZUU8 SNF1-related protein kinase regulatory subunit beta-31.0e-3664.35Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MN+   +D + TTVVGFEVP SP S+YNNVY  +EDE RDPP VPPHLQH+LL    S +       PQNV+LNHL+IENR+ PRSVVALGF+HRF +K+
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVV+YKPV RRGS+
Subjt:  VTVVLYKPVHRRGSS

Arabidopsis top hitse value%identityAlignment
AT2G28060.1 5'-AMP-activated protein kinase beta-2 subunit protein7.1e-3864.35Show/hide
Query:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY
        MN+   +D + TTVVGFEVP SP S+YNNVY  +EDE RDPP VPPHLQH+LL    S +       PQNV+LNHL+IENR+ PRSVVALGF+HRF +K+
Subjt:  MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVV+YKPV RRGS+
Subjt:  VTVVLYKPVHRRGSS

AT4G16360.1 5'-AMP-activated protein kinase beta-2 subunit protein1.3e-2654.37Show/hide
Query:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP+++Y+N+ +G+ED +++PP+VPPHLQ TLL+ PA+  D    LP PQ+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT4G16360.2 5'-AMP-activated protein kinase beta-2 subunit protein1.3e-2654.37Show/hide
Query:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP+++Y+N+ +G+ED +++PP+VPPHLQ TLL+ PA+  D    LP PQ+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT4G16360.3 5'-AMP-activated protein kinase beta-2 subunit protein1.3e-2654.37Show/hide
Query:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP+++Y+N+ +G+ED +++PP+VPPHLQ TLL+ PA+  D    LP PQ+VILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASR-DAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit protein1.2e-2150.51Show/hide
Query:  TVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR
        ++V FE P SPD +Y      +ED A++P  VPP L  TLL    + +       PQ+V+LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Subjt:  TVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCTTTACTCTGAAGATAGTGATCAGACCACCGTAGTGGGTTTTGAAGTCCCAAAGTCCCCCGATTCAACCTATAACAATGTATACATTGGGAGCGAAGACGA
GGCACGTGATCCACCACTTGTCCCGCCTCATTTGCAACACACCTTACTCAGCCAACCAGCGAGTAGAGATGCCGGTGGGACTCTTCCGTTGCCACAGAATGTGATTCTCA
ACCATCTTTTTATCGAAAACCGAGAGACTCCACGTTCCGTTGTTGCCCTTGGATTCACACATCGTTTTCATTCAAAATACGTCACGGTTGTGCTTTACAAACCGGTTCAT
AGAAGAGGAAGTAGCAGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCTTTACTCTGAAGATAGTGATCAGACCACCGTAGTGGGTTTTGAAGTCCCAAAGTCCCCCGATTCAACCTATAACAATGTATACATTGGGAGCGAAGACGA
GGCACGTGATCCACCACTTGTCCCGCCTCATTTGCAACACACCTTACTCAGCCAACCAGCGAGTAGAGATGCCGGTGGGACTCTTCCGTTGCCACAGAATGTGATTCTCA
ACCATCTTTTTATCGAAAACCGAGAGACTCCACGTTCCGTTGTTGCCCTTGGATTCACACATCGTTTTCATTCAAAATACGTCACGGTTGTGCTTTACAAACCGGTTCAT
AGAAGAGGAAGTAGCAGGGCTTAG
Protein sequenceShow/hide protein sequence
MNNLYSEDSDQTTVVGFEVPKSPDSTYNNVYIGSEDEARDPPLVPPHLQHTLLSQPASRDAGGTLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVH
RRGSSRA