; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001351 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001351
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor TCP7
Genome locationChr09:16311497..16312030
RNA-Seq ExpressionHG10001351
SyntenyHG10001351
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145813.1 transcription factor TCP7 [Cucumis sativus]3.7e-8089.94Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVK+ TSNS RNAPK NSP   ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
         C KP DPSSSN  STTTS FEEET GGNNYAFPM+NECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE +DD
Subjt:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

XP_008465370.1 PREDICTED: transcription factor TCP7 [Cucumis melo]1.6e-8090.45Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVKK TSNS RNAPK NSP   ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD
         C KPFDPSSSN+ STTTS FEEET GGNNYAFP +NECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE +D
Subjt:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD

XP_022140679.1 transcription factor TCP15-like [Momordica charantia]1.3e-6982.68Show/hide
Query:  MRVKKATSNSSRNAPK--SNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLD
        MRVKKATS+S RNAPK  SNSPN  ESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA L+
Subjt:  MRVKKATSNSSRNAPK--SNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLD

Query:  LPDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
        L  C P  PSSSNLS TTSCF++ET   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN EQ+D  D
Subjt:  LPDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

XP_022996075.1 transcription factor TCP14-like [Cucurbita maxima]4.3e-6577.97Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVKKATSNS R       PN  ESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA  +L 
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
         CKP DPSSS  +TTT+    +TF GNNYAFP ++E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E +DD
Subjt:  DCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

XP_038900506.1 transcription factor TCP16-like [Benincasa hispida]3.3e-8191.01Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        M+VKKATSNS RNAPK NSPN  ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DCKPFDP-SSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
         CKPFDP SSSNLSTTT+ F EETF GNNYAFPM NECIPLPNYEFDLVSDFDMELFAHHIA LQEVAENSE+E +DD
Subjt:  DCKPFDP-SSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KDC7 TCP domain-containing protein1.8e-8089.94Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVK+ TSNS RNAPK NSP   ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
         C KP DPSSSN  STTTS FEEET GGNNYAFPM+NECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE +DD
Subjt:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

A0A1S3CNQ2 transcription factor TCP77.9e-8190.45Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVKK TSNS RNAPK NSP   ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD
         C KPFDPSSSN+ STTTS FEEET GGNNYAFP +NECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE +D
Subjt:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD

A0A5A7T0X8 Transcription factor TCP77.9e-8190.45Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVKK TSNS RNAPK NSP   ESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLP
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD
         C KPFDPSSSN+ STTTS FEEET GGNNYAFP +NECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE +D
Subjt:  DC-KPFDPSSSNL-STTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDD

A0A6J1CGC4 transcription factor TCP15-like6.3e-7082.68Show/hide
Query:  MRVKKATSNSSRNAPK--SNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLD
        MRVKKATS+S RNAPK  SNSPN  ESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA L+
Subjt:  MRVKKATSNSSRNAPK--SNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLD

Query:  LPDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
        L  C P  PSSSNLS TTSCF++ET   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN EQ+D  D
Subjt:  LPDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

A0A6J1K5P6 transcription factor TCP14-like2.1e-6577.97Show/hide
Query:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP
        MRVKKATSNS R       PN  ESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA  +L 
Subjt:  MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLP

Query:  DCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD
         CKP DPSSS  +TTT+    +TF GNNYAFP ++E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E +DD
Subjt:  DCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

SwissProt top hitse value%identityAlignment
Q53PH2 Transcription factor PCF32.9e-1976.79Show/hide
Query:  KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        KDRH KV GR RRIR+P LCAARVFQLTRELG+KTDG+T+EWLL++AEP+I+A TG
Subjt:  KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

Q93Z00 Transcription factor TCP141.4e-1853.76Show/hide
Query:  SNSSRNAPKSNSPNV----PESKLIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        S S ++ P++    +     ES ++ +K P       KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG
Subjt:  SNSSRNAPKSNSPNV----PESKLIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

Q9C518 Transcription factor TCP81.1e-1871.19Show/hide
Query:  KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        ++ KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG
Subjt:  KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

Q9FTA2 Transcription factor TCP211.4e-1855.34Show/hide
Query:  ATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA---TLDLPDC
        A SN       SN   +   K  PS   KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A   T  L   
Subjt:  ATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA---TLDLPDC

Query:  KPF
         PF
Subjt:  KPF

Q9LQF0 Transcription factor TCP234.9e-1937.75Show/hide
Query:  APKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDI--------------ASATLDL
        AP S +  V  +K    +  KDRH KV GR RRIR+P +CAARVFQLTREL +K+DG+T+EWLL++AEP+IIA TG                 + +TL  
Subjt:  APKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDI--------------ASATLDL

Query:  PDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSD
        P  K F    +  +     F+++ +  ++      +  +P    E DL  D
Subjt:  PDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSD

Arabidopsis top hitse value%identityAlignment
AT1G35560.1 TCP family transcription factor3.5e-2037.75Show/hide
Query:  APKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDI--------------ASATLDL
        AP S +  V  +K    +  KDRH KV GR RRIR+P +CAARVFQLTREL +K+DG+T+EWLL++AEP+IIA TG                 + +TL  
Subjt:  APKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDI--------------ASATLDL

Query:  PDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSD
        P  K F    +  +     F+++ +  ++      +  +P    E DL  D
Subjt:  PDCKPFDPSSSNLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSD

AT1G58100.1 TCP family transcription factor7.7e-2071.19Show/hide
Query:  KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        ++ KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG
Subjt:  KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 141.0e-1953.76Show/hide
Query:  SNSSRNAPKSNSPNV----PESKLIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        S S ++ P++    +     ES ++ +K P       KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG
Subjt:  SNSSRNAPKSNSPNV----PESKLIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

AT5G08330.1 TCP family transcription factor1.0e-1955.34Show/hide
Query:  ATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA---TLDLPDC
        A SN       SN   +   K  PS   KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A   T  L   
Subjt:  ATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA---TLDLPDC

Query:  KPF
         PF
Subjt:  KPF

AT5G23280.1 TCP family transcription factor1.3e-1950.98Show/hide
Query:  MRVKKATSNSSRNAP----KSNSPNVPESKLIPSKAP--KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIAS
        M +    +N++ N       SN   + +   +  K P  KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     
Subjt:  MRVKKATSNSSRNAP----KSNSPNVPESKLIPSKAP--KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIAS

Query:  AT
        A+
Subjt:  AT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTAAGAAGGCTACATCTAACTCCTCAAGAAATGCACCAAAATCCAATTCGCCAAATGTCCCAGAGTCTAAGCTCATCCCTTCCAAGGCTCCAAAAGATCGACA
CGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCACCATTGTGTGCAGCTCGCGTGTTTCAGCTAACTCGTGAGCTTGGAAACAAAACAGACGGTCAGACTGTAG
AGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCTTTAACTGGTAAAGATATTGCCTCTGCTACTCTAGATTTGCCTGACTGCAAGCCTTTTGATCCATCTTCATCA
AACCTTTCTACTACTACAAGTTGTTTTGAAGAAGAAACTTTTGGTGGAAACAACTATGCATTCCCAATGATTAACGAATGCATACCTTTGCCAAATTATGAATTTGATTT
GGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATCGCCACGCTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAGACGACGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTAAGAAGGCTACATCTAACTCCTCAAGAAATGCACCAAAATCCAATTCGCCAAATGTCCCAGAGTCTAAGCTCATCCCTTCCAAGGCTCCAAAAGATCGACA
CGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCACCATTGTGTGCAGCTCGCGTGTTTCAGCTAACTCGTGAGCTTGGAAACAAAACAGACGGTCAGACTGTAG
AGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCTTTAACTGGTAAAGATATTGCCTCTGCTACTCTAGATTTGCCTGACTGCAAGCCTTTTGATCCATCTTCATCA
AACCTTTCTACTACTACAAGTTGTTTTGAAGAAGAAACTTTTGGTGGAAACAACTATGCATTCCCAATGATTAACGAATGCATACCTTTGCCAAATTATGAATTTGATTT
GGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATCGCCACGCTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAGACGACGATGATTGA
Protein sequenceShow/hide protein sequence
MRVKKATSNSSRNAPKSNSPNVPESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLPDCKPFDPSSS
NLSTTTSCFEEETFGGNNYAFPMINECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD