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HG10001384 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001384
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectinesterase
Genome locationChr09:16603790..16604017
RNA-Seq ExpressionHG10001384
SyntenyHG10001384
Gene Ontology termsGO:0045490 - pectin catabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647058.1 hypothetical protein Csa_023003, partial [Cucumis sativus]4.0e-2083.08Show/hide
Query:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGD
        ME ETA+AAILGRLGRHCYAVLCL VLLLTVAVVHYVGDG PTDPRER+KRRLR L G  I G D
Subjt:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGD

KAG6570773.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2078.87Show/hide
Query:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPP
        ME ETAV AILGRLGRHCYAVLCL VLLLTVAVVHYVGDG PTDPRERSKRRLR L         GGR PP
Subjt:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPP

KAG7010620.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-2177.33Show/hide
Query:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN
        ME ETAV AILGRLGRHCYAVLCL VLLLTVAVVHYVGDG PTDPRERSKRRLR L         GGR PP V N
Subjt:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN

VVA31225.1 Hypothetical predicted protein [Prunus dulcis]2.4e-0960.38Show/hide
Query:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR
        +LG+LGR CYAVLCL V++L V +V+YVG     DP ER++RRLRA+ GPP+R
Subjt:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]4.7e-2177.33Show/hide
Query:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN
        ME ETAV AILGRLGRHCYAVLCL VLLLTVAVVHYVGDG PTDPRERSKRRLR L         GGR PP V N
Subjt:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN

TrEMBL top hitse value%identityAlignment
A0A0A0KC65 Uncharacterized protein6.4e-2481.33Show/hide
Query:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN
        ME ETA+AAILGRLGRHCYAVLCL VLLLTVAVVHYVGDG PTDPRER+KRRLR L G  I G D  RQ PAVVN
Subjt:  MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN

A0A5E4FUM3 Uncharacterized protein1.2e-0960.38Show/hide
Query:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR
        +LG+LGR CYAVLCL V++L V +V+YVG     DP ER++RRLRA+ GPP+R
Subjt:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR

A0A660KR43 MLO-like protein3.4e-0962.26Show/hide
Query:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR
        +LG+LGR CYAVLCL VLL++V + H V    PTDPRER+ RRLR L+G P R
Subjt:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR

A0A6J5V5Y0 Uncharacterized protein3.4e-0960.38Show/hide
Query:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR
        +LG+LGR CYAVLCL V+LL V + +YVG     DP ER++RRLRA+ GPP R
Subjt:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR

A0A6J5XGV1 Uncharacterized protein3.4e-0960.38Show/hide
Query:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR
        +LG+LGR CYAVLCL V+LL V + +YVG     DP ER++RRLRA+ GPP R
Subjt:  ILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCGGAGACAGCGGTCGCGGCGATTCTCGGAAGGCTGGGGCGTCATTGCTATGCCGTGTTGTGTTTGGCAGTGCTTCTTCTCACGGTGGCCGTCGTTCACTACGT
CGGCGACGGACCGCCGACCGATCCTCGCGAACGGAGCAAGCGCCGCCTTCGAGCCTTGCAGGGCCCGCCCATTCGTGGCGGAGATGGCGGTCGTCAGCCGCCTGCGGTGG
TGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCGGAGACAGCGGTCGCGGCGATTCTCGGAAGGCTGGGGCGTCATTGCTATGCCGTGTTGTGTTTGGCAGTGCTTCTTCTCACGGTGGCCGTCGTTCACTACGT
CGGCGACGGACCGCCGACCGATCCTCGCGAACGGAGCAAGCGCCGCCTTCGAGCCTTGCAGGGCCCGCCCATTCGTGGCGGAGATGGCGGTCGTCAGCCGCCTGCGGTGG
TGAATTGA
Protein sequenceShow/hide protein sequence
MEPETAVAAILGRLGRHCYAVLCLAVLLLTVAVVHYVGDGPPTDPRERSKRRLRALQGPPIRGGDGGRQPPAVVN