; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001400 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001400
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOB domain-containing protein
Genome locationChr09:16733298..16734088
RNA-Seq ExpressionHG10001400
SyntenyHG10001400
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149555.1 LOB domain-containing protein 1 [Cucumis sativus]5.1e-4791.45Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSP--HNSSFQSI-SPS
        ELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFD+FNGSP  HN   QSI  PS
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSP--HNSSFQSI-SPS

Query:  YFDDS-NVNSLWEPLWT
        YFDDS NVNSLWEPLWT
Subjt:  YFDDS-NVNSLWEPLWT

XP_008463908.1 PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]7.1e-4993.91Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFD+FNGSPHN   QSI+ PSYF
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF

Query:  DDS-NVNSLWEPLWT
        DDS NVNSLWEPLWT
Subjt:  DDS-NVNSLWEPLWT

XP_022943961.1 LOB domain-containing protein 1-like [Cucurbita moschata]1.6e-4589.57Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFDD N   H+  F SI SPSY
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY

Query:  FDDSNVNSLWEPLWT
        FDD+NVN LWEPLWT
Subjt:  FDDSNVNSLWEPLWT

XP_023512010.1 LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]4.3e-4690.43Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFDD N   H+  FQSI SPSY
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY

Query:  FDDSNVNSLWEPLWT
        FDD+NVN LWEPLWT
Subjt:  FDDSNVNSLWEPLWT

XP_038902542.1 LOB domain-containing protein 1 [Benincasa hispida]8.1e-5397.35Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLV+FVCRELAQSHQSFDDFNGSPHN  FQSISPSYFD
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD

Query:  DSNVNSLWEPLWT
        DSNVNSLWEPLWT
Subjt:  DSNVNSLWEPLWT

TrEMBL top hitse value%identityAlignment
A0A0A0KCM5 LOB domain-containing protein2.5e-4791.45Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSP--HNSSFQSI-SPS
        ELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFD+FNGSP  HN   QSI  PS
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSP--HNSSFQSI-SPS

Query:  YFDDS-NVNSLWEPLWT
        YFDDS NVNSLWEPLWT
Subjt:  YFDDS-NVNSLWEPLWT

A0A1S3CKA7 LOB domain-containing protein 1-like3.5e-4993.91Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFD+FNGSPHN   QSI+ PSYF
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF

Query:  DDS-NVNSLWEPLWT
        DDS NVNSLWEPLWT
Subjt:  DDS-NVNSLWEPLWT

A0A5D3CSE3 LOB domain-containing protein 1-like3.5e-4993.91Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFD+FNGSPHN   QSI+ PSYF
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSIS-PSYF

Query:  DDS-NVNSLWEPLWT
        DDS NVNSLWEPLWT
Subjt:  DDS-NVNSLWEPLWT

A0A6J1FT49 LOB domain-containing protein 1-like8.0e-4689.57Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFDD N   H+  F SI SPSY
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY

Query:  FDDSNVNSLWEPLWT
        FDD+NVN LWEPLWT
Subjt:  FDDSNVNSLWEPLWT

A0A6J1J8I0 LOB domain-containing protein 18.0e-4689.57Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY
        ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFDD N   H+  F SI SPSY
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDDFNGSPHNSSFQSI-SPSY

Query:  FDDSNVNSLWEPLWT
        FDD+NVN LWEPLWT
Subjt:  FDDSNVNSLWEPLWT

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 152.8e-1156.45Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA
        E+PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA

Q8LBW3 LOB domain-containing protein 122.2e-1362.12Show/hide
Query:  VAMKFGELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ
        V+    ELP  QRADAV+SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q
Subjt:  VAMKFGELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ

Q9LQR0 LOB domain-containing protein 11.1e-2357.26Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD
        ELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+ELQAQLAKAQ E+VNMQ Q++NL+  +     Q  Q  D       N SF+S    + +
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD

Query:  D-SNVNS---LWEPLWT
        D SN NS    W+PLWT
Subjt:  D-SNVNS---LWEPLWT

Q9SHE9 LOB domain-containing protein 47.7e-1444.17Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISP----
        ELP  QR DAVSS+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+             H    D   S  + S + +SP    
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISP----

Query:  ---SYFDDSNVNSLWEPLWT
           S+ D  +  SL E +W+
Subjt:  ---SYFDDSNVNSLWEPLWT

Q9SK08 LOB domain-containing protein 111.5e-2047.76Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DDFNG
        ELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF       D+F  
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DDFNG

Query:  SPHNSSFQSISPSYFDDSNVN-----SLWEPLWT
        SP     +S    + +D+N N     S W+PLWT
Subjt:  SPHNSSFQSISPSYFDDSNVN-----SLWEPLWT

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 17.6e-2557.26Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD
        ELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+ELQAQLAKAQ E+VNMQ Q++NL+  +     Q  Q  D       N SF+S    + +
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISPSYFD

Query:  D-SNVNS---LWEPLWT
        D SN NS    W+PLWT
Subjt:  D-SNVNS---LWEPLWT

AT1G31320.1 LOB domain-containing protein 45.5e-1544.17Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISP----
        ELP  QR DAVSS+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+             H    D   S  + S + +SP    
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQSISP----

Query:  ---SYFDDSNVNSLWEPLWT
           S+ D  +  SL E +W+
Subjt:  ---SYFDDSNVNSLWEPLWT

AT2G28500.1 LOB domain-containing protein 111.0e-2147.76Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DDFNG
        ELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF       D+F  
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DDFNG

Query:  SPHNSSFQSISPSYFDDSNVN-----SLWEPLWT
        SP     +S    + +D+N N     S W+PLWT
Subjt:  SPHNSSFQSISPSYFDDSNVN-----SLWEPLWT

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.6e-1462.12Show/hide
Query:  VAMKFGELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ
        V+    ELP  QRADAV+SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q
Subjt:  VAMKFGELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQ

AT2G40470.1 LOB domain-containing protein 152.0e-1256.45Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA
        E+PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATTGATTTGTTACAAACTAACGACCTTGTTGCAATGAAATTTGGAGAACTCCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGC
GAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCAAAAGCTCAGGCTGAGGTTGTGAACA
TGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATAGCTCATTCCAGAGT
ATCAGTCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCATTGATTTGTTACAAACTAACGACCTTGTTGCAATGAAATTTGGAGAACTCCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGC
GAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCAAAAGCTCAGGCTGAGGTTGTGAACA
TGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATAGCTCATTCCAGAGT
ATCAGTCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGA
Protein sequenceShow/hide protein sequence
MCIDLLQTNDLVAMKFGELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDDFNGSPHNSSFQS
ISPSYFDDSNVNSLWEPLWT