; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001422 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001422
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionembryo-specific protein ATS3A-like
Genome locationChr09:16987209..16987646
RNA-Seq ExpressionHG10001422
SyntenyHG10001422
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010417 - Embryo-specific ATS3
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035277.1 uncharacterized protein E6C27_scaffold228G00690 [Cucumis melo var. makuwa]3.3e-7997.22Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLNSKHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+GADDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK
        RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK

XP_004148245.1 embryo-specific protein ATS3A isoform X1 [Cucumis sativus]1.1e-7794.48Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+G DDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

XP_008463858.1 PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo]1.1e-7997.24Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLNSKHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+GADDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

XP_011657238.1 embryo-specific protein ATS3A isoform X2 [Cucumis sativus]1.1e-7794.48Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+G DDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

XP_038902188.1 embryo-specific protein ATS3A-like [Benincasa hispida]9.6e-7996.55Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVV+RLNSK VRRVDPL+PQVLDDMSRKPFQ CMVDQFQVTGKCVTSPICYLYLKL GADDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

TrEMBL top hitse value%identityAlignment
A0A0A0KC84 Uncharacterized protein5.2e-7894.48Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+G DDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

A0A1S3CK61 uncharacterized protein LOC1035018935.5e-8097.24Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLNSKHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+GADDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

A0A5D3CVS5 Uncharacterized protein1.6e-7997.22Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVV+RLNSKHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYLKL+GADDWRPGFVQV
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK
        RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK

A0A6J1CYS2 embryo-specific protein ATS3A-like1.4e-7591.72Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVV+RLNS HV+RVDPLEP+VLDDMSRKPFQ CMVDQFQVTGKCVTSP+CY+YLKLAGADDWRPGFV+V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        RSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

A0A6J1L2N6 embryo-specific protein ATS3A-like6.1e-7188.97Show/hide
Query:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV
        MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVV  LNSKHVRRVD LEPQVLDDM RKPFQ CMVD FQVT KCVTSPICYLYLK+AGADDWRPGFV V
Subjt:  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQV

Query:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
        R LE PHLSSN FYFRRVLPRHVWHG DTC G+VTPFGIKR+RKV
Subjt:  RSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

SwissProt top hitse value%identityAlignment
Q681K2 Embryo-specific protein ATS3A8.3e-1733.59Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR
        Y V ++T+C+  + T + +S+ FGD   N++ VKR                LDD S + F+ C  D ++++G C+   +CYLYL   G+D W+P  V++ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR

Query:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTCPG
           G  + S  FY+   LP  VW+GF+ C G
Subjt:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTCPG

Q6NPM5 Embryo-specific protein ATS3B8.6e-1431.72Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR
        Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F+ C  D FQ+ G C T  ICY+YL  +G D W P  V++ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR

Query:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN
        S     ++   F +   +P  VW+GF+ C       V   G++R+
Subjt:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN

Q9LYP6 Embryo-specific protein ATS33.7e-0929.55Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  PIC LY+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ

Query:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC

Arabidopsis top hitse value%identityAlignment
AT2G41475.1 Embryo-specific protein 3, (ATS3)5.9e-1833.59Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR
        Y V ++T+C+  + T + +S+ FGD   N++ VKR                LDD S + F+ C  D ++++G C+   +CYLYL   G+D W+P  V++ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR

Query:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTCPG
           G  + S  FY+   LP  VW+GF+ C G
Subjt:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTCPG

AT5G07190.1 seed gene 32.7e-1029.55Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  PIC LY+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ

Query:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC

AT5G07190.2 seed gene 32.7e-1029.55Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ
        Y V V T+C     T + +S+ FGD + N +   +L                  + R P     C  + FQV G+C+  PIC LY+   G D W P  ++
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQ

Query:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC
        + S EG    S  F F + +P+ + W+G + C
Subjt:  VRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC

AT5G62200.1 Embryo-specific protein 3, (ATS3)6.1e-1531.72Show/hide
Query:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR
        Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F+ C  D FQ+ G C T  ICY+YL  +G D W P  V++ 
Subjt:  YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVR

Query:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN
        S     ++   F +   +P  VW+GF+ C       V   G++R+
Subjt:  SLEGPHLSSNYFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGCCGTCACCGTCGAAACAACTTGCACGAAAGGCGCCGACACATCGAACCACGTCAGCCTGAGATTCGGCGACACGAATTCAAACGACATTGTCGTAAAACGTTT
GAATTCGAAGCATGTGAGAAGGGTTGATCCTTTAGAACCTCAAGTTCTGGACGACATGTCGAGAAAGCCGTTTCAAGTTTGTATGGTGGATCAGTTCCAAGTGACAGGAA
AATGCGTGACGTCACCGATTTGTTACCTTTACCTTAAACTCGCCGGCGCCGACGACTGGCGCCCGGGATTCGTTCAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCG
AATTATTTCTATTTCCGACGAGTTTTGCCTCGGCACGTGTGGCATGGATTTGACACGTGCCCGGGGGAAGTCACTCCTTTTGGCATCAAACGCAATAGAAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGCCGTCACCGTCGAAACAACTTGCACGAAAGGCGCCGACACATCGAACCACGTCAGCCTGAGATTCGGCGACACGAATTCAAACGACATTGTCGTAAAACGTTT
GAATTCGAAGCATGTGAGAAGGGTTGATCCTTTAGAACCTCAAGTTCTGGACGACATGTCGAGAAAGCCGTTTCAAGTTTGTATGGTGGATCAGTTCCAAGTGACAGGAA
AATGCGTGACGTCACCGATTTGTTACCTTTACCTTAAACTCGCCGGCGCCGACGACTGGCGCCCGGGATTCGTTCAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCG
AATTATTTCTATTTCCGACGAGTTTTGCCTCGGCACGTGTGGCATGGATTTGACACGTGCCCGGGGGAAGTCACTCCTTTTGGCATCAAACGCAATAGAAAAGTTTAA
Protein sequenceShow/hide protein sequence
MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVKRLNSKHVRRVDPLEPQVLDDMSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLAGADDWRPGFVQVRSLEGPHLSS
NYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV