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HG10001474 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001474
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr09:17428646..17430202
RNA-Seq ExpressionHG10001474
SyntenyHG10001474
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649779.1 hypothetical protein Csa_012265 [Cucumis sativus]1.2e-0970.45Show/hide
Query:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCES
        +EVMEF PG E  + T WTRIHQSWVLW S EPPPS+PAI+CE+
Subjt:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCES
KAG6570707.1 Protein TRM32, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1380Show/hide
Query:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCESS
        +EVMEF PG+ET +GTKWTRIH SWVLWVSTEPPPSEP+I+CE+S
Subjt:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCESS
KAG7010553.1 hypothetical protein SDJN02_27347 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-1875.86Show/hide
Query:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCESSLASERKPHLCSFI
        +EVMEF PG+ET +GTKWTRIH SWVLWVSTEPPPSEP+I+CE+SLA+E KPHL  F+
Subjt:  LEVMEFAPGEETCAGTKWTRIHQSWVLWVSTEPPPSEPAISCESSLASERKPHLCSFI
KGN47177.2 hypothetical protein Csa_020828 [Cucumis sativus]1.3e-0845.87Show/hide
Query:  MENCLVGSHGMAVCEGLKAISLLLKASHLTELSNFTEEAKGLAAEKEYLWLFSSGSKPKPFPEVEVMEFVLSDVSPKGLEVMEFAPGEETCAGTKWTRIH
        MENCLVGSHGMAV    K            +L +F + A+ L    E L         +PFPEV               E MEF PGEETCAGTK TRI 
Subjt:  MENCLVGSHGMAVCEGLKAISLLLKASHLTELSNFTEEAKGLAAEKEYLWLFSSGSKPKPFPEVEVMEFVLSDVSPKGLEVMEFAPGEETCAGTKWTRIH

Query:  QSWVLWVST
        Q WVLWVST
Subjt:  QSWVLWVST
XP_031743531.1 uncharacterized protein LOC105435809 isoform X1 [Cucumis sativus]7.6e-0485.71Show/hide
Query:  MEFAPGEETCAGTKWTRIHQSWVLWVST
        MEF PGEETCAGTK TRI Q WVLWVST
Subjt:  MEFAPGEETCAGTKWTRIHQSWVLWVST
TrEMBL top hitse value%identityAlignment
A0A0A0KCA1 Uncharacterized protein8.4e-0945.95Show/hide
Query:  MENCLVGSHGMAVCE-GLKAISLLLKASHLTELSNFTEEAKGLAAEKEYLWLFSSGSKP-KPFPEVEVMEFVLSDVSPKGLEVMEFAPGEETCAGTKWTR
        MENCLVGSHGMAV      A    LK ++            G++ +K+        +KP KPFPEV               E MEF PGEETCAGTK TR
Subjt:  MENCLVGSHGMAVCE-GLKAISLLLKASHLTELSNFTEEAKGLAAEKEYLWLFSSGSKP-KPFPEVEVMEFVLSDVSPKGLEVMEFAPGEETCAGTKWTR

Query:  IHQSWVLWVST
        I Q WVLWVST
Subjt:  IHQSWVLWVST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTGCTTGGTTGGAAGCCATGGCATGGCTGTTTGTGAGGGATTGAAGGCCATTTCGCTGCTGCTCAAAGCTTCGCACCTCACGGAATTATCAAATTTCACTGA
GGAAGCTAAGGGTTTAGCTGCTGAAAAGGAATATCTATGGCTTTTCTCATCTGGGTCGAAGCCAAAACCGTTCCCTGAGGTAGAGGTTATGGAGTTTGTTTTATCGGATG
TGTCCCCGAAGGGACTAGAGGTTATGGAGTTTGCACCAGGCGAAGAGACTTGTGCTGGGACCAAGTGGACCAGGATTCACCAATCTTGGGTGCTGTGGGTATCCACGGAG
CCGCCTCCTTCTGAACCTGCCATATCCTGTGAATCTTCGTTAGCTTCTGAAAGAAAGCCCCACCTTTGTTCTTTTATTCTTCCTATTGCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATTGCTTGGTTGGAAGCCATGGCATGGCTGTTTGTGAGGGATTGAAGGCCATTTCGCTGCTGCTCAAAGCTTCGCACCTCACGGAATTATCAAATTTCACTGA
GGAAGCTAAGGGTTTAGCTGCTGAAAAGGAATATCTATGGCTTTTCTCATCTGGGTCGAAGCCAAAACCGTTCCCTGAGGTAGAGGTTATGGAGTTTGTTTTATCGGATG
TGTCCCCGAAGGGACTAGAGGTTATGGAGTTTGCACCAGGCGAAGAGACTTGTGCTGGGACCAAGTGGACCAGGATTCACCAATCTTGGGTGCTGTGGGTATCCACGGAG
CCGCCTCCTTCTGAACCTGCCATATCCTGTGAATCTTCGTTAGCTTCTGAAAGAAAGCCCCACCTTTGTTCTTTTATTCTTCCTATTGCTATTTAA
Protein sequenceShow/hide protein sequence
MENCLVGSHGMAVCEGLKAISLLLKASHLTELSNFTEEAKGLAAEKEYLWLFSSGSKPKPFPEVEVMEFVLSDVSPKGLEVMEFAPGEETCAGTKWTRIHQSWVLWVSTE
PPPSEPAISCESSLASERKPHLCSFILPIAI