; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001577 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001577
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationChr09:18302232..18305369
RNA-Seq ExpressionHG10001577
SyntenyHG10001577
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059955.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo var. makuwa]4.6e-5492.86Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLSADVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVK
        ATTIARFTKQTDQWLAATHALNTAVK
Subjt:  ATTIARFTKQTDQWLAATHALNTAVK

XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]1.2e-5491.41Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLSADVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
        ATTIARFTKQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]2.7e-5491.41Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNR KFQSETERL+ADVGGLEASLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
         TTIARFTKQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

XP_031742805.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X2 [Cucumis sativus]1.0e-5392.86Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNR KFQSETERL+ADVGGLEASLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVK
         TTIARFTKQTDQWLAATHALNTAVK
Subjt:  ATTIARFTKQTDQWLAATHALNTAVK

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]2.6e-5793.75Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSS GPSRPDLPVAPNRGKFQSETE L+A+VGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
        ATTIARFTKQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

TrEMBL top hitse value%identityAlignment
A0A0A0KEG1 Biogenesis of lysosome-related organelles complex 1 subunit 14.9e-5492.86Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNR KFQSETERL+ADVGGLEASLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVK
         TTIARFTKQTDQWLAATHALNTAVK
Subjt:  ATTIARFTKQTDQWLAATHALNTAVK

A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 15.8e-5591.41Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLSADVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
        ATTIARFTKQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 12.2e-5492.86Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLSADVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVK
        ATTIARFTKQTDQWLAATHALNTAVK
Subjt:  ATTIARFTKQTDQWLAATHALNTAVK

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 12.3e-5187.5Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS  G SR  LP   NRGKFQSE ERLSADVGGLEASL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
        +TTI RF KQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 15.6e-5085.94Show/hide
Query:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS  G SR   P A NRGKFQSE ERLSADVGGLEASL QMVNDH YASLKLRENSEKAKKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKDL
        +TTI RF KQTDQWLAATHALNTAVK++
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKDL

SwissProt top hitse value%identityAlignment
A1Z9S1 Biogenesis of lysosome-related organelles complex 1 subunit 13.2e-1036.67Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL
        L  MV +HH    K ++  E  +K+AI+ +  ++  LVD +N GV ++++NQK ++ E + L      F KQT QWL      +TA+KDL
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL

O22929 Biogenesis of lysosome-related organelles complex 1 subunit 11.4e-2657.14Show/hide
Query:  ETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE+SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKDL
        AVK++
Subjt:  AVKDL

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 16.5e-1135.56Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL
        L +++ +H     + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T  A+F KQT QW++     N A+K++
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 11.4e-0831.11Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL
        L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+K++
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 11.9e-1040Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL
        L ++V DH     KL+E +E  KK+AI     V++ L+D+VN GV   F NQK +E E R L    A+F+KQT+QW+      N ++K++
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKDL

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein1.0e-2757.14Show/hide
Query:  ETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE+SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKDL
        AVK++
Subjt:  AVKDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGCCGGGGCCATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCGCCGACGTTGGTGGATTGGAAGC
TTCGTTGCTTCAGATGGTCAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCGCGATTTACGAAGCAG
ACCGATCAATGGCTCGCTGCCACTCACGCTTTGAACACTGCCGTTAAGGATTTAATACCCTACAAGTTGCATTGGCAACCAAATGTAGTAAGGTCAGATGGTTGTCCCAT
GGGAATAGTTGAGGTGTACAAAAATGACTGTATCTTTGTTGACAAACTCAGCCACTCTCATTTCCTAGCGTCTGGAGGAGTCCCGTTTTGTTATACTTCAACAGAAAAGA
GGCCCAGGCTTGAGCTGAACCCGCTGACGATTCTGATGGGATTGCTTTCTACGTTAATTCTGGATTCATCTTGGCTTGGACGTCAACAGCACTCAGTTTTGGATTTGGAG
AATACTCATTTTGACTTCGTGGTACACTTTATCCTTCCTTGTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTTCGCCGGGGCCATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCGCCGACGTTGGTGGATTGGAAGC
TTCGTTGCTTCAGATGGTCAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCGCGATTTACGAAGCAG
ACCGATCAATGGCTCGCTGCCACTCACGCTTTGAACACTGCCGTTAAGGATTTAATACCCTACAAGTTGCATTGGCAACCAAATGTAGTAAGGTCAGATGGTTGTCCCAT
GGGAATAGTTGAGGTGTACAAAAATGACTGTATCTTTGTTGACAAACTCAGCCACTCTCATTTCCTAGCGTCTGGAGGAGTCCCGTTTTGTTATACTTCAACAGAAAAGA
GGCCCAGGCTTGAGCTGAACCCGCTGACGATTCTGATGGGATTGCTTTCTACGTTAATTCTGGATTCATCTTGGCTTGGACGTCAACAGCACTCAGTTTTGGATTTGGAG
AATACTCATTTTGACTTCGTGGTACACTTTATCCTTCCTTGTTATTAA
Protein sequenceShow/hide protein sequence
MNSSPGPSRPDLPVAPNRGKFQSETERLSADVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQ
TDQWLAATHALNTAVKDLIPYKLHWQPNVVRSDGCPMGIVEVYKNDCIFVDKLSHSHFLASGGVPFCYTSTEKRPRLELNPLTILMGLLSTLILDSSWLGRQQHSVLDLE
NTHFDFVVHFILPCY