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HG10001609 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001609
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUPF0678 fatty acid-binding protein-like protein
Genome locationChr09:18630213..18634266
RNA-Seq ExpressionHG10001609
SyntenyHG10001609
Gene Ontology termsNA
InterPro domainsIPR012674 - Calycin
IPR014878 - THAP4-like, heme-binding beta-barrel domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139918.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus]6.1e-4767.06Show/hide
Query:  MDGELP----PVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------
        MDGELP    P PAPA LSIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSGK                                       
Subjt:  MDGELP----PVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------

Query:  --------KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
                KGTY+AEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  --------KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

XP_008456272.1 PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis melo]3.6e-4767.47Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPP  APA  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGT++AEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

XP_016901924.1 PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucumis melo]1.1e-4873.2Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK----------------------------------KGTYDAEEK
        MDGELPP  APA  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK                                  KGT++AEEK
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK----------------------------------KGTYDAEEK

Query:  VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
        VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

XP_023512065.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo]6.8e-4666.27Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPPVPAP  LSIHPAV PLSFLLGTWRGKGDGGFPTINSFSYGEE+HFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGTY+AEEKVI LQSE+VGNASKVKEISR FKLVDGELSYVVQMATGLTSLQPHLKA LTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

XP_038900799.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida]9.4e-4868.07Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPP PAP  LSIHPAVTPLSFLLGTWRG+GDGGFPTINSFSYGEELHFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGTY+AEEKVIKLQSELVGNASKVKEISRVFKLVDGELSY+VQMATGLTSLQPHLKALLTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

TrEMBL top hitse value%identityAlignment
A0A0A0KAL2 DUF1794 domain-containing protein3.0e-4767.06Show/hide
Query:  MDGELP----PVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------
        MDGELP    P PAPA LSIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSGK                                       
Subjt:  MDGELP----PVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------

Query:  --------KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
                KGTY+AEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  --------KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

A0A1S3C440 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X11.7e-4767.47Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPP  APA  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGT++AEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

A0A1S4E121 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X25.4e-4973.2Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK----------------------------------KGTYDAEEK
        MDGELPP  APA  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK                                  KGT++AEEK
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK----------------------------------KGTYDAEEK

Query:  VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
        VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Subjt:  VIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

A0A6J1FXD9 UPF0678 fatty acid-binding protein-like protein At1g792602.8e-4565.66Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPPVPAP  LSIHPAV PLSFLLGTWRGKGDGGFPTINSFSYGEE+HFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGTY+AEEKVI LQSE+VGNASKVKEISR FKLVDGELSYVVQMATGLTSLQ HLKA LTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

A0A6J1JFE2 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X22.1e-4565.06Show/hide
Query:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------
        MDGELPP+PAP  LSIHPAV PLSFLLGTWRGKGDGGFPTINSFSYGEE+HFSHSGK                                           
Subjt:  MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-------------------------------------------

Query:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
            KGTY+AEEKVI LQSE+VGNASKVKEISR FKLVDGELSYVVQMATG TSLQPHLKA LTKV
Subjt:  ----KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

SwissProt top hitse value%identityAlignment
A1SPL4 UPF0678 fatty acid-binding protein-like protein Noca_42529.9e-0828.21Show/hide
Query:  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKKGTY---------DAEEKV--------------------------------------
        ++HP   P+++LLG W G+G G +PTI  F YG+EL F+H G+   +         DA EKV                                      
Subjt:  SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKKGTY---------DAEEKV--------------------------------------

Query:  --IKLQSELVGNASKVKEIS---RVFKLVDGELSYVVQMATGLTSLQPHLKALLTK
          ++L ++ V      KE +   R++  V+G+L Y   MA     LQPHL A L +
Subjt:  --IKLQSELVGNASKVKEIS---RVFKLVDGELSYVVQMATGLTSLQPHLKALLTK

A3PTJ4 UPF0678 fatty acid-binding protein-like protein Mjls_04089.9e-0852.08Show/hide
Query:  APALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK
        A  +  +HP +T L+ LLGTW GKG G +PTI  F Y EE+ F H+GK
Subjt:  APALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK

B2HLY1 UPF0678 fatty acid-binding protein-like protein MMAR_19959.9e-0829.68Show/hide
Query:  IHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKK-----------------------------------------------GTYDAEEKVI
        +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GK                                                GTY A   VI
Subjt:  IHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKK-----------------------------------------------GTYDAEEKVI

Query:  KLQS-----ELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTK
        +++       +   A +V  +SR F++V  ELSY ++M      LQ HL A L +
Subjt:  KLQS-----ELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTK

O64527 UPF0678 fatty acid-binding protein-like protein At1g792604.1e-3047.56Show/hide
Query:  GELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------------
        GE PPV        HP V PLS+LLGTWRG+G+G +PTI SF YGEE+ FSHSGK                                             
Subjt:  GELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------------

Query:  --KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
          KGTY+ +E+ IKL+S+LVGNASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA+L K+
Subjt:  --KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV

Q1BEZ2 UPF0678 fatty acid-binding protein-like protein Mmcs_04219.9e-0852.08Show/hide
Query:  APALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK
        A  +  +HP +T L+ LLGTW GKG G +PTI  F Y EE+ F H+GK
Subjt:  APALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK

Arabidopsis top hitse value%identityAlignment
AT1G79260.1 CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.9e-3147.56Show/hide
Query:  GELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------------
        GE PPV        HP V PLS+LLGTWRG+G+G +PTI SF YGEE+ FSHSGK                                             
Subjt:  GELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK---------------------------------------------

Query:  --KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV
          KGTY+ +E+ IKL+S+LVGNASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA+L K+
Subjt:  --KGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQPHLKALLTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGGCTCTGTTGTCCATCCACCCGGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGGAAAGGCGACGGTGG
ATTCCCCACCATTAATTCTTTCTCTTACGGCGAGGAGCTTCACTTCTCCCATTCCGGCAAGAAAGGAACATATGATGCAGAAGAGAAAGTGATAAAGCTCCAAAGTGAAC
TTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCA
CACTTAAAAGCCTTGCTTACTAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGGCTCTGTTGTCCATCCACCCGGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGGAAAGGCGACGGTGG
ATTCCCCACCATTAATTCTTTCTCTTACGGCGAGGAGCTTCACTTCTCCCATTCCGGCAAGAAAGGAACATATGATGCAGAAGAGAAAGTGATAAAGCTCCAAAGTGAAC
TTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCA
CACTTAAAAGCCTTGCTTACTAAAGTTTGA
Protein sequenceShow/hide protein sequence
MDGELPPVPAPALLSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKKGTYDAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATGLTSLQP
HLKALLTKV