; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001635 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001635
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin
Genome locationChr09:18921276..18923781
RNA-Seq ExpressionHG10001635
SyntenyHG10001635
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EYU29190.1 hypothetical protein MIMGU_mgv1a015494mg [Erythranthe guttata]2.1e-2262.28Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F     +  + P      + E +  K         LIYAGKQL DDKTAKDYNIE
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE

Query:  GGSVLHLVLALRGG
        GGSVLHLVLALRGG
Subjt:  GGSVLHLVLALRGG

KAF5749247.1 hypothetical protein HS088_TW04G01212 [Tripterygium wilfordii]1.2e-2059.82Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK---LLLIYAGKQLGDDKTAKDYNIEGGSV
        MQIFVKTLTGKTITLEVESSDT+DNVKAKIQS                             +   EE+ ++   L LIYAGKQL DDKTA+DYNIEGGSV
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK---LLLIYAGKQLGDDKTAKDYNIEGGSV

Query:  LHLVLALRGGYL
        LHLVLALRGG L
Subjt:  LHLVLALRGGYL

KAG6387884.1 hypothetical protein SASPL_153079 [Salvia splendens]1.2e-2060.53Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ   L                +  + P      + E +  K         LIYAGKQLGDDKTAKDYNIE
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE

Query:  GGSVLHLVLALRGG
        GGSVLHLVLALRGG
Subjt:  GGSVLHLVLALRGG

RLM56215.1 hypothetical protein C2845_PM10G17510 [Panicum miliaceum]2.0e-2063.55Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ  +     P+G            +F  S+   +  +      LIYAGKQL DDKTAKDYNIEGGSVLHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGG
        VLALRGG
Subjt:  VLALRGG

RLN11761.1 hypothetical protein C2845_PM09G20060 [Panicum miliaceum]1.8e-2161.82Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ-SDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKL--LLIYAGKQLGDDKTAKDYNIEGGSV
        MQIFVKTLTGKTITL+VESSDTIDNVKAKIQ S+   +P+    C                       + W L  +LIYAGKQL DDKTAKDYNIEGGSV
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ-SDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKL--LLIYAGKQLGDDKTAKDYNIEGGSV

Query:  LHLVLALRGG
        LHLVLALRGG
Subjt:  LHLVLALRGG

TrEMBL top hitse value%identityAlignment
A0A022QRQ2 Ubiquitin-like domain-containing protein1.0e-2262.28Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F     +  + P      + E +  K         LIYAGKQL DDKTAKDYNIE
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK-------LLLIYAGKQLGDDKTAKDYNIE

Query:  GGSVLHLVLALRGG
        GGSVLHLVLALRGG
Subjt:  GGSVLHLVLALRGG

A0A3L6PJN4 Ubiquitin-like domain-containing protein9.7e-2163.55Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ  +     P+G            +F  S+   +  +      LIYAGKQL DDKTAKDYNIEGGSVLHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGG
        VLALRGG
Subjt:  VLALRGG

A0A3L6RXW9 Ubiquitin-like domain-containing protein8.8e-2261.82Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ-SDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKL--LLIYAGKQLGDDKTAKDYNIEGGSV
        MQIFVKTLTGKTITL+VESSDTIDNVKAKIQ S+   +P+    C                       + W L  +LIYAGKQL DDKTAKDYNIEGGSV
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ-SDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKL--LLIYAGKQLGDDKTAKDYNIEGGSV

Query:  LHLVLALRGG
        LHLVLALRGG
Subjt:  LHLVLALRGG

A0A7J7DSH1 Ubiquitin-like domain-containing protein5.7e-2159.82Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK---LLLIYAGKQLGDDKTAKDYNIEGGSV
        MQIFVKTLTGKTITLEVESSDT+DNVKAKIQS                             +   EE+ ++   L LIYAGKQL DDKTA+DYNIEGGSV
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWK---LLLIYAGKQLGDDKTAKDYNIEGGSV

Query:  LHLVLALRGGYL
        LHLVLALRGG L
Subjt:  LHLVLALRGGYL

R7W7L9 Ubiquitin-like domain-containing protein2.0e-2163.55Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F   +                       LIYAGKQL DDKTAKDYNIEGGSVLHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGG
        VLALRGG
Subjt:  VLALRGG

SwissProt top hitse value%identityAlignment
P0C030 Ubiquitin-NEDD8-like protein RUB15.5e-2147.4Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY
                           LIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY

P0C031 Ubiquitin-NEDD8-like protein RUB23.5e-2047.06Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
                           LIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

P0C073 Ubiquitin-NEDD8-like protein RUB15.5e-2147.4Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY
                           LIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY

Q8RUC6 Ubiquitin-NEDD8-like protein RUB21.3e-1946.45Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
                           LIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL

Q9SHE7 Ubiquitin-NEDD8-like protein RUB11.6e-2046.75Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY
                           LIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY

Arabidopsis top hitse value%identityAlignment
AT1G31340.1 related to ubiquitin 11.1e-2146.75Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY
                           LIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY

AT2G35635.1 ubiquitin 79.6e-2146.45Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP       F                   S    +L  R   +   + +  K +          
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFF-----------------MPSRFQFILFPRSIYVFVAEEMLWKLL----------

Query:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
                           LIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Subjt:  -------------------LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL

AT4G02890.1 Ubiquitin family protein7.6e-1852.78Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP                                +  LI+AGKQL D +T  DYNI+  S LHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGGY
        VL LRGG+
Subjt:  VLALRGGY

AT4G05050.1 ubiquitin 117.6e-1852.78Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP                                +  LI+AGKQL D +T  DYNI+  S LHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGGY
        VL LRGG+
Subjt:  VLALRGGY

AT4G05320.2 polyubiquitin 107.6e-1852.78Show/hide
Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQ D   IP                                +  LI+AGKQL D +T  DYNI+  S LHL
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHL

Query:  VLALRGGY
        VL LRGG+
Subjt:  VLALRGGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGTCTGATTACTTGGAGAT
TCCTTCGCCGTCCGGAAGTTGTTTCTTTATGCCGTCTCGATTTCAGTTTATTTTGTTTCCTCGTTCTATCTATGTCTTCGTTGCAGAGGAGATGCTATGGAAACTCTTGC
TCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGATTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTTGCCCTGAGGGGTGGTTATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGTCTGATTACTTGGAGAT
TCCTTCGCCGTCCGGAAGTTGTTTCTTTATGCCGTCTCGATTTCAGTTTATTTTGTTTCCTCGTTCTATCTATGTCTTCGTTGCAGAGGAGATGCTATGGAAACTCTTGC
TCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGATTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTTGCCCTGAGGGGTGGTTATCTGTAA
Protein sequenceShow/hide protein sequence
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSDYLEIPSPSGSCFFMPSRFQFILFPRSIYVFVAEEMLWKLLLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL