; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001680 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001680
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein RALF-like 17
Genome locationChr09:19417207..19417554
RNA-Seq ExpressionHG10001680
SyntenyHG10001680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054503.1 hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa]4.1e-4078.63Show/hide
Query:  MAVSRRLAL-LSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILH-EGEEFD
        MA+SRRLAL LSLGTIL  FLF RVSAAGS+YG DIHTVRH SDTADCKRE  DKGDQCRE+ND+ EDDDFDDTYK+VNNIA+TLSASG+IL  + EE D
Subjt:  MAVSRRLAL-LSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILH-EGEEFD

Query:  DVPAAEEEIGNMFIVGH
        D+P++EEEIGNM IVGH
Subjt:  DVPAAEEEIGNMFIVGH

KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]3.4e-3473.91Show/hide
Query:  MAVSRRLAL-LSLGTILLCFLFIRVS-AAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNIL-HEGEEF
        MA+SRRL L L+LGTIL CFLFI VS AAG +YG DIHTV+H SDTA+CKRE  DKGDQCREEND+ EDDDFDDTYK+VNNIAVTLSASG IL  E EE 
Subjt:  MAVSRRLAL-LSLGTILLCFLFIRVS-AAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNIL-HEGEEF

Query:  DDVPAAEEEIGNMFI
        +D+P++EEE+GN+ I
Subjt:  DDVPAAEEEIGNMFI

KAF3443367.1 hypothetical protein FNV43_RR13049 [Rhamnella rubrinervis]6.8e-1142.73Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVE-DDDFDDTYKMVNNIAVTLSA---SGNILHEGEE
        MA+SR L L  LGT+ +  L I+V+ A      DIH+V+H   +  CK  DP+KG+QC ++ + +E DDDFDDTYK+VN + V+LS    S   +  G+ 
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVE-DDDFDDTYKMVNNIAVTLSA---SGNILHEGEE

Query:  FDDVPAAEEE
        F+D  A + E
Subjt:  FDDVPAAEEE

KAG6570557.1 hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3673.04Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEGEEFDDV
        MAVSRRLALLSLGTILLC LF R + A S+YG DIHTVRHSSD+ +C RE P KGDQCREEND VED+DFDDTYK+VNN+A+ LSASG+ L E EE DD+
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEGEEFDDV

Query:  PAAEEEIGNMFIVGH
        P  EEEI N+ IVGH
Subjt:  PAAEEEIGNMFIVGH

KAG6604744.1 hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2064.89Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEG
        MAVSRRLAL SLGTILLCFL  R + A S++G ++H VR+SS   D    + +K  QCR+END V DDDFDDTYK+VNNIA+TLSASG IL EG
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEG

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ4 Uncharacterized protein1.0e-3674.58Show/hide
Query:  MAVSRRLAL-LSLGTILLCFLFIRVS-AAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNIL-HEGEEF
        MA+SRRL L L+LGTIL CFLFI VS AAG +YG DIHTV+H SDTA+CKRE  DKGDQCREEND+ EDDDFDDTYK+VNNIAVTLSASG IL  E EE 
Subjt:  MAVSRRLAL-LSLGTILLCFLFIRVS-AAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNIL-HEGEEF

Query:  DDVPAAEEEIGNMFIVGH
        +D+P++EEE+GN+ IVGH
Subjt:  DDVPAAEEEIGNMFIVGH

A0A2N9FLD3 Uncharacterized protein6.6e-1242.98Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAG-SEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVE--DDDFDDTYKMVNNIAVTLSASGNILHEGEE-
        MA+SR + L  LGT+L+C L I+VS A  S++   IH ++H  D   C    P+ GDQCR ++D  E  DDD DDTYK+VN ++V+ SAS       E+ 
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAG-SEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVE--DDDFDDTYKMVNNIAVTLSASGNILHEGEE-

Query:  -FDDVPAAEEEIGN-MFIVGH
           D  + EEE+ N M ++GH
Subjt:  -FDDVPAAEEEIGN-MFIVGH

A0A498J3I4 Uncharacterized protein4.3e-1144.07Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCRE-ENDVVEDDDFDDTYKMVNNIAVTLSA-SGNILHEGEEFD
        MAVSRRL LL LGT+L     ++V+ A   +G             DC   DP+ GDQCRE E D V DDD DDTYK+VN +AVTLSA +G +  + +E  
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCRE-ENDVVEDDDFDDTYKMVNNIAVTLSA-SGNILHEGEEFD

Query:  DVPAAEE-EIGNMFIVGH
        D    E+ E  ++ ++GH
Subjt:  DVPAAEE-EIGNMFIVGH

A0A540MMV8 Uncharacterized protein2.1e-1043.33Show/hide
Query:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCRE-ENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEGEEFDD
        MAVSRRL LL LGT+L     ++V+ A   +G             DC   DP+ GDQCRE E D V DDD DDTYK+VN +AVTLSA    +  G   D+
Subjt:  MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCRE-ENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEGEEFDD

Query:  VPAAEE----EIGNMFIVGH
        +P A++    E  ++ ++GH
Subjt:  VPAAEE----EIGNMFIVGH

A0A5D3CVV2 Uncharacterized protein2.0e-4078.63Show/hide
Query:  MAVSRRLAL-LSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILH-EGEEFD
        MA+SRRLAL LSLGTIL  FLF RVSAAGS+YG DIHTVRH SDTADCKRE  DKGDQCRE+ND+ EDDDFDDTYK+VNNIA+TLSASG+IL  + EE D
Subjt:  MAVSRRLAL-LSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILH-EGEEFD

Query:  DVPAAEEEIGNMFIVGH
        D+P++EEEIGNM IVGH
Subjt:  DVPAAEEEIGNMFIVGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTCAAGACGACTGGCCCTTCTTTCCCTCGGAACAATCCTTCTCTGCTTCTTGTTCATCAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACAC
CGTCAGGCACTCCTCCGACACCGCCGACTGCAAGCGCGAAGACCCCGACAAAGGCGACCAATGCAGGGAGGAAAACGACGTCGTTGAGGACGATGATTTCGACGACACCT
ACAAAATGGTCAACAACATCGCCGTAACCCTATCGGCGTCCGGAAATATACTTCACGAGGGGGAGGAATTTGACGATGTCCCGGCGGCGGAGGAAGAGATCGGCAACATG
TTTATAGTGGGGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTTCAAGACGACTGGCCCTTCTTTCCCTCGGAACAATCCTTCTCTGCTTCTTGTTCATCAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACAC
CGTCAGGCACTCCTCCGACACCGCCGACTGCAAGCGCGAAGACCCCGACAAAGGCGACCAATGCAGGGAGGAAAACGACGTCGTTGAGGACGATGATTTCGACGACACCT
ACAAAATGGTCAACAACATCGCCGTAACCCTATCGGCGTCCGGAAATATACTTCACGAGGGGGAGGAATTTGACGATGTCCCGGCGGCGGAGGAAGAGATCGGCAACATG
TTTATAGTGGGGCACTGA
Protein sequenceShow/hide protein sequence
MAVSRRLALLSLGTILLCFLFIRVSAAGSEYGGDIHTVRHSSDTADCKREDPDKGDQCREENDVVEDDDFDDTYKMVNNIAVTLSASGNILHEGEEFDDVPAAEEEIGNM
FIVGH