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HG10001721 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001721
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLoricrin-like
Genome locationChr09:19828304..19828543
RNA-Seq ExpressionHG10001721
SyntenyHG10001721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2611902.1 loricrin-like [Pyrus ussuriensis x Pyrus communis]2.2e-0550Show/hide
Query:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC
        MGR  +G  G   G+V +V    +SGGL LL +IL+S+SLISMVIFACG + G + K+RG G A      CG  G GC
Subjt:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]5.7e-0953.25Show/hide
Query:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        MGR I  A G G GDV L SSGGL LL+ +LLS+SL+SM+IFACG+S    K++ +G     G   G  GCG DV G
Subjt:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1056.94Show/hide
Query:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCG
        MGRPI  A G G GDV L SSGGL LL+ IL+S+SL+SM+IFACG+S    K++ +G    AG  CG  GCG
Subjt:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1261.25Show/hide
Query:  MGRPILGAT--GAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC
        MGRPIL A   G GF DV LVSSGGLFLLS ILLSISL+SM+IFACGNS + ++K G G     G+  G  GCG    GC
Subjt:  MGRPILGAT--GAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC

KGN61189.1 hypothetical protein Csa_006542 [Cucumis sativus]2.7e-0650.65Show/hide
Query:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        MGRPI     A  GDV     GGL LLS+ILLSISL+SM+IFAC N   ++++RG     + G +CG  GCG   CG
Subjt:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

TrEMBL top hitse value%identityAlignment
A0A0A0LJD5 Uncharacterized protein1.3e-0650.65Show/hide
Query:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        MGRPI     A  GDV     GGL LLS+ILLSISL+SM+IFAC N   ++++RG     + G +CG  GCG   CG
Subjt:  MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

A0A498HAM0 Uncharacterized protein4.6e-0445.33Show/hide
Query:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGN-SGESQKKRGDGVAVSAGESCGSEG
        M R  +G  G   G+V ++    +SGGL LL +IL+S+SLISMVIFACG+  G ++++RG G A   G   G  G
Subjt:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGN-SGESQKKRGDGVAVSAGESCGSEG

A0A5N5GEI7 Loricrin-like1.1e-0550Show/hide
Query:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC
        MGR  +G  G   G+V +V    +SGGL LL +IL+S+SLISMVIFACG + G + K+RG G A      CG  G GC
Subjt:  MGRPILGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC

A5B1D1 Uncharacterized protein1.9e-0555.22Show/hide
Query:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC
        G + LVSSGGLFLL +I +++S+ISMVIFAC   NSG  +KK+GD V    G   G  GCGC   GC
Subjt:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC

M5WY52 Uncharacterized protein3.5e-0461.11Show/hide
Query:  SSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGC
        +SGG+FLL +ILLS+SLISMVIFACG+   S KKR  G   S G  CG  G GC
Subjt:  SSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCCAATTCTTGGTGCCACCGGCGCTGGCTTCGGAGATGTCAACTTGGTGAGCTCCGGGGGCCTATTTTTGCTATCCGTCATCTTACTATCCATCTCTCTCAT
ATCAATGGTCATATTTGCTTGCGGCAACTCCGGTGAGTCTCAAAAGAAAAGAGGTGATGGCGTCGCCGTCAGCGCCGGCGAAAGTTGCGGCAGCGAAGGTTGTGGGTGCG
ATGTCTGTGGGTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGCCAATTCTTGGTGCCACCGGCGCTGGCTTCGGAGATGTCAACTTGGTGAGCTCCGGGGGCCTATTTTTGCTATCCGTCATCTTACTATCCATCTCTCTCAT
ATCAATGGTCATATTTGCTTGCGGCAACTCCGGTGAGTCTCAAAAGAAAAGAGGTGATGGCGTCGCCGTCAGCGCCGGCGAAAGTTGCGGCAGCGAAGGTTGTGGGTGCG
ATGTCTGTGGGTGCTTCTGA
Protein sequenceShow/hide protein sequence
MGRPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGCF