; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001731 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001731
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr09:19915168..19915581
RNA-Seq ExpressionHG10001731
SyntenyHG10001731
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010382.1 putative E3 ubiquitin-protein ligase RING1a [Cucurbita argyrosperma subsp. argyrosperma]6.4e-2488.37Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSV+GE+  DQQFSHQDAKQSR EREPKTE EEEEE EEEEQRE LKEGEREDEGREEDEGEEEKQHN+LEEA GAR
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

XP_008448257.1 PREDICTED: putative E3 ubiquitin-protein ligase RING1b isoform X1 [Cucumis melo]2.2e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

XP_008448258.1 PREDICTED: putative E3 ubiquitin-protein ligase RING1b isoform X2 [Cucumis melo]2.2e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

XP_008448260.1 PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X4 [Cucumis melo]2.2e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

XP_038901730.1 putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida]8.1e-2794.25Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEI--EEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEI  EEEEEEEEEQREQLKEGEREDEGR EDEGEEEKQH KLEEA GAR
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEI--EEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

TrEMBL top hitse value%identityAlignment
A0A1S3BIP1 putative E3 ubiquitin-protein ligase RING1b isoform X11.1e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

A0A1S3BJA1 putative E3 ubiquitin-protein ligase RING1b isoform X21.1e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

A0A1S3BJV9 putative E3 ubiquitin-protein ligase RING1a isoform X41.1e-2487.06Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTERE  TEIEEEEEEEE++ EQLKEG+R DEGREEDEGEEEKQ  +LEEATG R
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

A0A6J1FTH1 putative E3 ubiquitin-protein ligase RING1b isoform X13.1e-2488.37Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSV+GE+  DQQFSHQDAKQSR EREPKTE EEEEE EEEEQRE LKEGEREDEGREEDEGEEEKQHN+LEEA GAR
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

A0A6J1FY08 putative E3 ubiquitin-protein ligase RING1a isoform X23.1e-2488.37Show/hide
Query:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR
        MPAHKRSWSDSV+GE+  DQQFSHQDAKQSR EREPKTE EEEEE EEEEQRE LKEGEREDEGREEDEGEEEKQHN+LEEA GAR
Subjt:  MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEE-EEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCACATAAACGCTCTTGGTCAGACAGTGTTCACGGAGAAGACCCCAGAGACCAACAATTCAGCCATCAAGATGCCAAGCAATCTCGAACAGAACGCGAGCCGAA
GACTGAAATAGAAGAAGAAGAAGAAGAGGAGGAGGAGCAACGGGAACAGCTGAAGGAAGGAGAACGAGAAGATGAAGGGCGCGAAGAAGACGAAGGAGAGGAAGAAAAGC
AACACAATAAATTGGAAGAAGCGACCGGAGCGAGAGGTTACGTTACGTGTATTCCTTTTCCTTTCTTCTTGGATTTCTTCTGCTTGGTTGTTCTGGTTCCAATTCTACGC
TTCTGGTTATGGTTCTTGCTTGGTTTACCGTTTGCTGAAGCTGTTCCATGTGTTTTCAGATTCCGAAGGAAGCCAATCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCACATAAACGCTCTTGGTCAGACAGTGTTCACGGAGAAGACCCCAGAGACCAACAATTCAGCCATCAAGATGCCAAGCAATCTCGAACAGAACGCGAGCCGAA
GACTGAAATAGAAGAAGAAGAAGAAGAGGAGGAGGAGCAACGGGAACAGCTGAAGGAAGGAGAACGAGAAGATGAAGGGCGCGAAGAAGACGAAGGAGAGGAAGAAAAGC
AACACAATAAATTGGAAGAAGCGACCGGAGCGAGAGGTTACGTTACGTGTATTCCTTTTCCTTTCTTCTTGGATTTCTTCTGCTTGGTTGTTCTGGTTCCAATTCTACGC
TTCTGGTTATGGTTCTTGCTTGGTTTACCGTTTGCTGAAGCTGTTCCATGTGTTTTCAGATTCCGAAGGAAGCCAATCCTCTAG
Protein sequenceShow/hide protein sequence
MPAHKRSWSDSVHGEDPRDQQFSHQDAKQSRTEREPKTEIEEEEEEEEEQREQLKEGEREDEGREEDEGEEEKQHNKLEEATGARGYVTCIPFPFFLDFFCLVVLVPILR
FWLWFLLGLPFAEAVPCVFRFRRKPIL