CuGenDBv2

Gene ID	HG10001733
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNA polymerase II subunit 5-mediating protein homolog isoform X1
Genome location	Chr09:19937579..19940991
RNA-Seq Expression	HG10001733
Synteny	HG10001733
Gene Ontology terms	NA
InterPro domains	IPR004127 - Prefoldin alpha-like IPR009053 - Prefoldin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0062034.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]

3.4e-158

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE QR+LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L   V
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

TYK04987.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]

6.9e-159

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L  GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

XP_008448308.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis melo]

7.6e-158

79.56

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE  S                                V
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

XP_016900539.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo]

6.9e-159

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L  GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

XP_038901192.1 RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida]

3.9e-170

84.48

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Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        ME GGAKGTVTPL+SLFPAQ+AHKAA RVQ +ISEKQRELE LRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFF ATA+E+EEGLVEI+EEYVEENFSEQ+SGS                               GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQQQ-E
        NKQDVPSVSGVD+AKIAEEDAEYARIM+RLDELEK EELAAANGDQSDEEDE+EKETS+QSLEKFYDDKQSYSK STSA L DEN+GSKELLD+YQQQ E
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQQQ-E

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SN SGLS QSSSKEDVSSGKNSL+QTQRVRNPNPAAKSVTFAEVKEKNQ LPPST+EAFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB27 Uncharacterized protein

7.7e-156

78.57

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        ME+G  KGTVT L+SLFPAQDA KAA+RVQ +ISEKQRELE LRGFITDN NLI LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQT EILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVEENF EQES S                               GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDVPSVSGVD+AKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EK T NQSLE+FY DKQS SK STS   RDEN+ SKELL++YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQ+S KEDV+SG NSLT++QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPKT+KQ+TET LQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

A0A1S3BK98 RNA polymerase II subunit 5-mediating protein homolog isoform X2

3.7e-158

79.56

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE  S                                V
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

A0A1S4DX32 RNA polymerase II subunit 5-mediating protein homolog isoform X1

3.3e-159

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L  GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

A0A5A7V404 RNA polymerase II subunit 5-mediating protein-like protein isoform X1

1.7e-158

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE QR+LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L   V
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

A0A5D3BZL3 RNA polymerase II subunit 5-mediating protein-like protein isoform X1

3.3e-159

79.8

Show/hide

Query:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAG  KGTVTPLSSLFPAQDA KAA+RVQ +ISE Q++LE L+GFITDN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV
        TSKQTVEILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVEENF EQE                               L  GV
Subjt:  TSKQTVEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGV

Query:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE
        NKQDV  VSGVDEAKIAE DAEYAR+M+R DELEK EELAAANG++SD+EDE+EKET NQSLEKFYDDKQSYS+ STSA LRDEN+ SKELLD+YQ QQE
Subjt:  NKQDVPSVSGVDEAKIAEEDAEYARIMSRLDELEK-EELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQ-QQE

Query:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR
        ASTN SNCSGLSVQSS KEDV+SG +SLTQ+QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPKT+KQ+TETPLQPSGSQPSKPVSR
Subjt:  ASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSR

Query:  FKMQRR
        FKMQRR
Subjt:  FKMQRR

SwissProt top hits

e value

%identity

Alignment

O94763 Unconventional prefoldin RPB5 interactor 1

1.7e-11

24.57

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Query:  PLSSLFP--AQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEIL
        P  +L P  A D  +     +  ++  Q  ++H +    D   L   +  LP++L + +MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V ++
Subjt:  PLSSLFP--AQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEIL

Query:  KRRGKALDSQVDSLKAMMDNLKAEASFFD--ATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPS
        + R + +   +D LK +M N ++   F +     S+A   +V+IREE                             ++ +       R+    + +  P 
Subjt:  KRRGKALDSQVDSLKAMMDNLKAEASFFD--ATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPS

Query:  VSGVDEAKIAEEDAEY-----ARIMSRLDELEKEE-----------LAAANGDQ--SDEEDEDEKETSNQSLEKFYDDKQSYSKESTSA
         S + EA IA +           + +RL+ELE++E              ANG+   S EE+++++ T+  ++ +  D      K+  S+
Subjt:  VSGVDEAKIAEEDAEY-----ARIMSRLDELEKEE-----------LAAANGDQ--SDEEDEDEKETSNQSLEKFYDDKQSYSKESTSA

Q3B7M7 Unconventional prefoldin RPB5 interactor

1.1e-10

25.72

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Query:  ISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDNLKA
        ++  Q +++H +    D   L   +  LP++L + +MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M N ++
Subjt:  ISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDNLKA

Query:  EASFFD--ATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPSVSGVDEAKIAEE--------DAE
           F +     S+A   +V+IRE                               EI+T      +          P  S + EA+ A +        D E
Subjt:  EASFFD--ATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPSVSGVDEAKIAEE--------DAE

Query:  YARIMSRLDELEKEE-------------LAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENL
           +  RL+ELE++E                ANG+  D   E+EKE  N ++   +    S +  S    L +  L
Subjt:  YARIMSRLDELEKEE-------------LAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENL

Q3TLD5 Unconventional prefoldin RPB5 interactor

9.8e-15

33.87

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Query:  ISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDNLKA
        ++  Q +++H      D + L   ++ LP++L ++VMVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D  K ++ N ++
Subjt:  ISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDNLKA

Query:  EASFFD--ATASEAEEGLVEIREE
           F +     S+A    V+IREE
Subjt:  EASFFD--ATASEAEEGLVEIREE

Q54HG4 RNA polymerase II subunit 5-mediating protein homolog

1.2e-17

28.72

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Query:  RVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMM
        + +  + E Q  +E L+    D   LI+ +Q LP+ L  ++MVP GK AFF G L +TNE L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +
Subjt:  RVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMM

Query:  DNLKAEAS----FFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPSVSGVDEAKIAEE----
          LK   S       A   +  + +VEI+EEY  +   E+E                           K  + P         + +  D+ K  EE    
Subjt:  DNLKAEAS----FFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPSVSGVDEAKIAEE----

Query:  ---DAEYARIMSRLDELEKEELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQQQE
           D E+ +++ RL  LE++E     GD  DEE+ ++K   N+ L+    D++ Y  ++ +    D++   ++   EY Q+E
Subjt:  ---DAEYARIMSRLDELEKEELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQQQE

Arabidopsis top hits

e value

%identity

Alignment

AT1G03760.1 Prefoldin chaperone subunit family protein

2.1e-52

39.53

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Query:  AKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT
        AKGTVTPL   F  +D  KAA+ ++  I EK+ E+  L+ ++ +N NLINLV+KLP++LHH VMVPFGK AFFPGRLIHTNE LVLLGE YY +R+SKQT
Subjt:  AKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT

Query:  VEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDV
        V+ LKRR K L SQ+ SLKA +++L+ EASFF  TASE  +GLVEIREEYVEE+ S                      V I +S  +   L  G      
Subjt:  VEILKRRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDV

Query:  PSVSGVDEAKIAEEDAEYARIMSRLDELE-KEELAAANGDQSDEEDEDEKETSNQ--------SLEKFYDDKQSYSKE-------------STSARLRDE
              +E ++  ED ++ARIM+RL+ELE +EEL   +GD   E+ +   E+  Q        S  +    +  Y K+             S+S R+ + 
Subjt:  PSVSGVDEAKIAEEDAEYARIMSRLDELE-KEELAAANGDQSDEEDEDEKETSNQ--------SLEKFYDDKQSYSKE-------------STSARLRDE

Query:  NLGSK--ELLDEYQQQEASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPP--STSEAFTGSIIERPPTIPKTAKQ
         + +K  ++L E    +   +  N      Q  SKE  S G       +  ++    AK+      K + Q   P   +++AFTGSI+E    +  +A  
Subjt:  NLGSK--ELLDEYQQQEASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQRVRNPNPAAKSVTFAEVKEKNQALPP--STSEAFTGSIIERPPTIPKTAKQ

Query:  DTETPLQPSGSQPSKPVSRFKMQRR
         T    Q S SQPSKPVSRF+ +RR
Subjt:  DTETPLQPSGSQPSKPVSRFKMQRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCAGGAGGAGCAAAGGGCACGGTGACGCCACTGTCCTCTTTATTTCCTGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGGTTCGATTTCTGAGAAGCA
GAGGGAGCTTGAGCATCTCCGAGGTTTCATCACTGATAATGCTAACCTGATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTCATGGTTCCATTTGGGA
AGGCCGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAA
AGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGATAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCCGAAGCTGAAGAGGG
TCTAGTCGAGATAAGGGAGGAATATGTGGAAGAAAACTTTAGTGAGCAGGAATCTGGATCAGGTTGGCTCTTATACCTTTCCCTCCTTTTGTTGCTATGTTATGTTTTGG
TTGAAATTGAGACTTCATTGGTAAAGAGCTTAAGACTTCCTGGTGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGAGGCAAAGATTGCAGAAGAGGAC
GCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAACTTGCTGCTGCAAATGGCGACCAAAGTGATGAAGAAGATGAGGATGAGAAAGAAACTTC
AAATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGAAAGTACTTCTGCGCGGCTGAGGGATGAAAATCTAGGTAGTAAAGAGCTACTGGATGAGT
ATCAACAACAAGAGGCTTCTACCAATCAATCAAATTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGAAGACGTGTCAAGTGGCAAAAATTCTTTGACTCAGACTCAG
CGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTTGCTGAAGTAAAAGAAAAGAATCAAGCATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATAAT
TGAGCGCCCTCCTACGATACCAAAAACTGCTAAACAAGATACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCATCAAAACCAGTATCCAGATTCAAGATGCAAAGAA
GATAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MEAGGAKGTVTPLSSLFPAQDAHKAATRVQGSISEKQRELEHLRGFITDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILK
RRGKALDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEENFSEQESGSGWLLYLSLLLLLCYVLVEIETSLVKSLRLPGGVNKQDVPSVSGVDEAKIAEED
AEYARIMSRLDELEKEELAAANGDQSDEEDEDEKETSNQSLEKFYDDKQSYSKESTSARLRDENLGSKELLDEYQQQEASTNQSNCSGLSVQSSSKEDVSSGKNSLTQTQ
RVRNPNPAAKSVTFAEVKEKNQALPPSTSEAFTGSIIERPPTIPKTAKQDTETPLQPSGSQPSKPVSRFKMQRR

HG10001733 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome