; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001763 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001763
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCiliary neurotrophic factor
Genome locationChr11:251705..254333
RNA-Seq ExpressionHG10001763
SyntenyHG10001763
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044571.1 uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa]1.2e-6179.67Show/hide
Query:  MELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEV
        MELISLAIRRLMEEN N T SHRSS    D DD+QLLS+LLS+VESTREEQRLNH    S+QED +IIET+LE + E NVER+   VKTE EIVKELKEV
Subjt:  MELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEV

Query:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLGTILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD
Subjt:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

KAE8649098.1 hypothetical protein Csa_015237 [Cucumis sativus]1.3e-6079.89Show/hide
Query:  MELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELK
        MELISLAIRRLMEEN + T SHRSS   A  D DD+QLLSRLLS+VESTR EQRLNH    S+QED +IIET+LE + E NVER+   +KTE EIVKELK
Subjt:  MELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELK

Query:  EVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        EVK+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL TILKRKTTSAIQ QIEATELPHLN+PALPHVTLP+FD
Subjt:  EVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

XP_004152113.1 uncharacterized protein LOC101214522 [Cucumis sativus]9.2e-6279.38Show/hide
Query:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVK
        MAEA  AA EMELISLAIRRLMEEN + T SHRSS   A  D DD+QLLSRLLS+VESTR EQRLNH    S+QED +IIET+LE + E NVER+   +K
Subjt:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVK

Query:  TEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        TE EIVKELKEVK+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL TILKRKTTSAIQ QIEATELPHLN+PALPHVTLP+FD
Subjt:  TEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

XP_008454012.1 PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]1.1e-6278.65Show/hide
Query:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTE
        M +AAE  EEMELISLAIRRLMEEN N T SHRSS    D DD+QLLS+LLS+VESTREEQRLNH    S+QED +IIET+LE + E NVER+   VKTE
Subjt:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTE

Query:  KEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
         EIVKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLGTILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD
Subjt:  KEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]7.7e-7788.89Show/hide
Query:  AEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNG-SIVKTEKEIV
        AEA EEMELISLAIRRLMEE+DN TASHRSSGA  D  DLQLLSRLLSQVESTREEQRLNHSQIS+QQ+DEKIIET+LEPQSENVER+G + VK EK IV
Subjt:  AEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNG-SIVKTEKEIV

Query:  KELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFDLE
        KELKEVKRQNFITHCLVSAMIILTVAWQ+SEVSFILKLR+GLSNPFKSLGTILKRKTTSAIQ QIEATELPHLNMPALPHV LPEFDL+
Subjt:  KELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFDLE

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein4.4e-6279.38Show/hide
Query:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVK
        MAEA  AA EMELISLAIRRLMEEN + T SHRSS   A  D DD+QLLSRLLS+VESTR EQRLNH    S+QED +IIET+LE + E NVER+   +K
Subjt:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSS--GAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVK

Query:  TEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        TE EIVKELKEVK+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL TILKRKTTSAIQ QIEATELPHLN+PALPHVTLP+FD
Subjt:  TEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

A0A1S3BXR6 uncharacterized protein LOC1034945625.2e-6378.65Show/hide
Query:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTE
        M +AAE  EEMELISLAIRRLMEEN N T SHRSS    D DD+QLLS+LLS+VESTREEQRLNH    S+QED +IIET+LE + E NVER+   VKTE
Subjt:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTE

Query:  KEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
         EIVKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLGTILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD
Subjt:  KEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

A0A5A7TSP6 Uncharacterized protein5.8e-6279.67Show/hide
Query:  MELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEV
        MELISLAIRRLMEEN N T SHRSS    D DD+QLLS+LLS+VESTREEQRLNH    S+QED +IIET+LE + E NVER+   VKTE EIVKELKEV
Subjt:  MELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEV

Query:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLGTILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD
Subjt:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

A0A5D3CZN3 Uncharacterized protein1.6e-5678.36Show/hide
Query:  MEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEVKRQNFITHCLV
        MEEN N T SHRSS    D DD+QLLS+LLS+VESTREEQRLNH    S+QED +IIET+LE + E NVER+   VKTE EIVKELKEVK+QNF+THCLV
Subjt:  MEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSE-NVERNGSIVKTEKEIVKELKEVKRQNFITHCLV

Query:  SAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD
        SAMIILTVAWQISEVSFILKLRDG LSNPFKSLGTILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD
Subjt:  SAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFD

A0A6J1IS75 uncharacterized protein LOC1114794851.2e-5169.11Show/hide
Query:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNGSIVKTEK
        MAEA  AAEEMELISLAIRRLMEE +N T SHRSSG     +DLQ LSRLLSQVESTRE+ R  HS     Q+D+KII+ +L               TEK
Subjt:  MAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNGSIVKTEK

Query:  EIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFDL
        EIVKE+KEVKRQNFITHCLVSAM++LTVAWQ+SEVSFILKLRDGLSNPFKSL  ILKR TTSAIQ +IEATEL     PALPHV LP+F L
Subjt:  EIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein3.1e-1537.09Show/hide
Query:  EAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNGSIVKTEKEIVKE
        E++E++E +S AI +L+ E     AS        D DD   LS L+SQ+ES   + +     I+ ++E+++    D  P     E    + ++ +EI K+
Subjt:  EAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNGSIVKTEKEIVKE

Query:  LKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTIL
        +K+VK+QN ITH L+SA IILT+ WQ+SE S I  L+D +S+P +S+G +L
Subjt:  LKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTGTTGCCGGAGAAAGAAAGTGGAGAGGAAAAAGAAGAAAAAGAGATGGCGGAGGCGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAG
ACTGATGGAGGAGAACGACAACAGCACCGCCTCTCATCGGAGCTCAGGCGCCGGCGGCGACGACGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAA
CAAGAGAAGAACAGAGGCTCAACCACTCCCAAATCTCATCTCAGCAAGAGGATGAGAAAATAATTGAGACAGACTTAGAGCCTCAAAGTGAAAATGTGGAAAGAAATGGA
AGCATAGTGAAAACAGAGAAGGAGATCGTGAAAGAGCTAAAAGAAGTGAAGAGGCAGAATTTTATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTG
GCAAATCTCTGAGGTGTCTTTCATTTTGAAACTCAGAGATGGCTTGAGCAATCCATTCAAATCCCTGGGTACAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAAC
AGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGACCCTACCAGAGTTTGACTTGGAAATTAATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTGTTGCCGGAGAAAGAAAGTGGAGAGGAAAAAGAAGAAAAAGAGATGGCGGAGGCGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAG
ACTGATGGAGGAGAACGACAACAGCACCGCCTCTCATCGGAGCTCAGGCGCCGGCGGCGACGACGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAA
CAAGAGAAGAACAGAGGCTCAACCACTCCCAAATCTCATCTCAGCAAGAGGATGAGAAAATAATTGAGACAGACTTAGAGCCTCAAAGTGAAAATGTGGAAAGAAATGGA
AGCATAGTGAAAACAGAGAAGGAGATCGTGAAAGAGCTAAAAGAAGTGAAGAGGCAGAATTTTATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTG
GCAAATCTCTGAGGTGTCTTTCATTTTGAAACTCAGAGATGGCTTGAGCAATCCATTCAAATCCCTGGGTACAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAAC
AGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGACCCTACCAGAGTTTGACTTGGAAATTAATACCTGA
Protein sequenceShow/hide protein sequence
MILLPEKESGEEKEEKEMAEAAEAAEEMELISLAIRRLMEENDNSTASHRSSGAGGDDDDLQLLSRLLSQVESTREEQRLNHSQISSQQEDEKIIETDLEPQSENVERNG
SIVKTEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGTILKRKTTSAIQQQIEATELPHLNMPALPHVTLPEFDLEINT