; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001770 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001770
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description30S ribosomal protein S1
Genome locationChr11:318954..328633
RNA-Seq ExpressionHG10001770
SyntenyHG10001770
Gene Ontology termsGO:0071840 - cellular component organization or biogenesis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018465.1 30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.6e-16382.71Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFLSL AS DAS S ST F+L  KS SKRPSNF  RVSLSGKP+PIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSE+VGVGDVYEARVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DGLYHLTGLVH+SEVSWDLVQDVRDIL                ++   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

XP_022955545.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 [Cucurbita moschata]3.6e-16382.45Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFLSL AS DAS S ST F+L  KS SKRPSNF  RVSLSGKP+PIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSE+VGVGDVYEARVGS+EDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DGLYHLTGLVH+SEVSWDLVQDVRDIL                ++   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

XP_022979820.1 uncharacterized protein LOC111479406 [Cucurbita maxima]4.3e-16482.71Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFLSL AS DAS+S S+ F+L  KS SKRPSNF  RVSLSGKP+PIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DG YHLTGLVH+SEVSWDLVQDVRDIL                +L   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

XP_023526022.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp. pepo]7.3e-16482.98Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFL+L AS DAS S ST F L  KS SKRPSNF  RVSLSGKPDPIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DGLYHLTGLVH+SEVSWDLVQDVRDIL                ++   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

XP_038897871.1 30S ribosomal protein S1 homolog B [Benincasa hispida]5.6e-17287.23Show/hide
Query:  MPIFAATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGRI
        MPIFAATLGS+ A SFLSL AS     S ST FILPQKS SKRPSNFP RVSLSGKPDPIAGVLDTSPSSPESLRR+RRSADWKAAREYL++GFIYEGRI
Subjt:  MPIFAATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVH
        EGSNAGGLLVRFYSLMGFLPFPQLSPSHSC+EPYKSIQDIAKSLIGSL+SVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVH

Query:  LRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        LRF+DGLYHLTGLVHVSEVSWDLVQDVRDIL           +  +V +++  RDKSRITLSIKQLEEDPLLETLDKVIPQ GSAEPDSFGPKSDS I+P
Subjt:  LRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGLETIIEELLQEDGIVDI +NRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KTX2 Uncharacterized protein1.7e-15881.27Show/hide
Query:  MPIFAATLGSLSASSFLSLFASI-DAS--YSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYE
        MPIF AT+ S+SA SFLSL AS  DAS   S S+ FILP KS SKR S FP RVSLSGKPDPIAGVLDT   SPES+RR+RRSADWKAAREYL+SGFIYE
Subjt:  MPIFAATLGSLSASSFLSLFASI-DAS--YSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYE

Query:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGA
        GRIEGSNAGGLLVRFYSL+GFLPFPQLSPSHSC+EPYKSIQDIAKSLIGSL+SVKVIQADE+N+KLIFSEKEAA SKFS QV VGDVYE +VGSVEDYGA
Subjt:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGA

Query:  FVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSA
        FVHLR +DGLYHLTGLVHVSEVSWDLVQDVRDIL           +  +V +++  ++KSRITLSI+QLEEDPLLETLDKVIPQ+ SAEPDSFGPK DS 
Subjt:  FVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSA

Query:  IIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        IIPLPGLETIIEELLQE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  IIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

A0A1S3BXL4 30S ribosomal protein S1 isoform X14.1e-16082.06Show/hide
Query:  MPIFAATLGSLSASSFLSLFASI-DAS--YSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYE
        MPIF AT+ S+S  SFLSL AS  DAS   S S+  ILP KS SKRPS FP RVSLSGKPDPIAGVLDT   SPES+RR+RRSADWKAAREYL+SGFIYE
Subjt:  MPIFAATLGSLSASSFLSLFASI-DAS--YSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYE

Query:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGA
        GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSC+EP KSIQDIAKSL GSL+SVKVIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGA
Subjt:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGA

Query:  FVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSA
        FVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDIL           +  +V +++  RDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS 
Subjt:  FVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSA

Query:  IIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  IIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

A0A6J1CUJ6 uncharacterized protein LOC1110147141.3e-15881.07Show/hide
Query:  MPIFAATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLD-TSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPI  ATLGSLS  SFLS FAS D+  SPS+       S SKR  NFPPR+SL   PDPIAGVLD TSP+SPESL RSRRS DWKAAREYL+SGFIYEGR
Subjt:  MPIFAATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLD-TSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRF+SL+GFLPFPQLSPSHSC+EPYKSIQDIAKSL+GS+V VK+IQADERNKKLIFSEKEAAWSKFSEQV VG+VY+ARVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DGLYHLTGLVHVSEVSWDLVQDVRDIL                ++   R+KSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGP+SDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLK
        LPGLETI EELLQEDGI D+R+NRQGFEKRVVSQDLQLWLSNAP VEKKF LLARAGRQVQEIQLTTSLDQEG+K
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLK

A0A6J1GVD7 LOW QUALITY PROTEIN: uncharacterized protein LOC1114575271.8e-16382.45Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFLSL AS DAS S ST F+L  KS SKRPSNF  RVSLSGKP+PIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSE+VGVGDVYEARVGS+EDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DGLYHLTGLVH+SEVSWDLVQDVRDIL                ++   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

A0A6J1IUF3 uncharacterized protein LOC1114794062.1e-16482.71Show/hide
Query:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR
        MPIFAA TLGSLSA SFLSL AS DAS+S S+ F+L  KS SKRPSNF  RVSLSGKP+PIAGVL++SPSSPES+RR+RRSADWK AREYL+SGFI++GR
Subjt:  MPIFAA-TLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGR

Query:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
        IEGSNAGGLLVRFYSL+GFLPFP LSP+HSC+EPYKSIQDIAKSLIGSL+ VKVIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV
Subjt:  IEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFV

Query:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP
        HLRF+DG YHLTGLVH+SEVSWDLVQDVRDIL                +L   RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIP
Subjt:  HLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIP

Query:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        LPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFTLLARAGRQVQEIQLTTSLDQEG+K+
Subjt:  LPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK

SwissProt top hitse value%identityAlignment
O33698 30S ribosomal protein S11.7e-0927.7Show/hide
Query:  SLRRSRRSADWKAAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAW
        SLR       W    E  E G   + ++ GSN GG+      L  F+P   L+            ++   SL G  ++V  ++ +  +KKL+ SE++AA 
Subjt:  SLRRSRRSADWKAAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAW

Query:  SKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDIL-IYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLL
        +    ++ VG +   +V  ++ +G FV L  A      T L+ ++++S   V DV  I  I D   A        +++     K RI+LS K LE  P  
Subjt:  SKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDIL-IYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLL

Query:  ETLDKVIPQDGSA
        E L+ V     SA
Subjt:  ETLDKVIPQDGSA

P37985 30S ribosomal protein S18.2e-0932.31Show/hide
Query:  IGSLVSVKVIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLV--QDVRDILIYDHCHAF
        +G +V V V+  DE  +++    K+     W +F+E    GD  E ++ S+ D+G F+ L   DG   + GLVH+S++SW++   + VR+    D   A 
Subjt:  IGSLVSVKVIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLV--QDVRDILIYDHCHAF

Query:  HRWNAESVLLVSRRDKSRITLSIKQLEEDP
               V+L    ++ RI+L +KQL EDP
Subjt:  HRWNAESVLLVSRRDKSRITLSIKQLEEDP

P50889 30S ribosomal protein S12.6e-1028.1Show/hide
Query:  SRRSADWKAAREYLE--SGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSK
        S++  D + A E L    G   + ++  +  GGL+V    + GF+P   ++         + + D+        +  +VI+ D  N +LI S K  A  +
Subjt:  SRRSADWKAAREYLE--SGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSK

Query:  FSEQ-------VGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEE
         + Q       + VG+V E  V  + D+GAFV L   D      GLVHVSE+S D V++  D+L             +  +L    +K RI+LSIK  + 
Subjt:  FSEQ-------VGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEE

Query:  DPLLETLDKV
         P  E  D++
Subjt:  DPLLETLDKV

P74142 30S ribosomal protein S1 homolog B1.6e-1226.13Show/hide
Query:  LDTSPSSPE-SLRRSRR----SADWKAAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADE
        L TS  + E  +R SRR       W+   E  ESG   E  + G+N GG++     L GF+P   L             +D   +L+G ++   +++A++
Subjt:  LDTSPSSPE-SLRRSRR----SADWKAAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADE

Query:  RNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRI
         N KL+ +++    ++   ++  G++YE +V  ++ YG FV +        +TGL+HVS+VS   V  +  +  +    + +    +         K+RI
Subjt:  RNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRI

Query:  TLSIKQLEEDP--LLETLDKVI
        +LS + LE  P  L+E  D+++
Subjt:  TLSIKQLEEDP--LLETLDKVI

Q9HZ71 30S ribosomal protein S14.8e-0932.56Show/hide
Query:  IGSLVSVKVIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHR
        +G  V V+V+  DE  +++    K+     W  FS Q   GD     + S+ D+G F+ L   DG   + GLVH+S++SW+ V +       +    F +
Subjt:  IGSLVSVKVIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHR

Query:  WN-AESVLLVSRRDKSRITLSIKQLEEDP
         +  E+V+L    ++ RI+L IKQLE+DP
Subjt:  WN-AESVLLVSRRDKSRITLSIKQLEEDP

Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein7.1e-1629.32Show/hide
Query:  QDIAKSLIGSLVSVKVIQADERNKKLIFS----EKEAAWSK---FSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDI
        Q    S +G  + V V+ A+  ++KLIFS    E E    K      ++ VGDV +  +  +  +G F  L        +  LVH SEVSWD   D    
Subjt:  QDIAKSLIGSLVSVKVIQADERNKKLIFS----EKEAAWSK---FSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDI

Query:  LIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPL--PGLETIIEELLQEDGIVDIRINRQGFEK
                      +  L        RI LS+K++  DPL E L+ V+  D     D  G +  +A +    P +E++I+EL   +GI  +  +R  F  
Subjt:  LIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPL--PGLETIIEELLQEDGIVDIRINRQGFEK

Query:  RVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKKKV
          ++   Q+++  AP  E ++ LLARAG +VQE+ +  SL +E +K  +
Subjt:  RVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKKKV

AT3G23700.1 Nucleic acid-binding proteins superfamily2.2e-10556.23Show/hide
Query:  AATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSL--SGKPDPIAGVLDTSPSSPESLRRSRRSA------------------DWK
        A TLGS+S +S L            STF   P + L    S+   R SL    K    +   DT  +S +S   S  SA                  DWK
Subjt:  AATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSL--SGKPDPIAGVLDTSPSSPESLRRSRRSA------------------DWK

Query:  AAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDV
         A+ Y +SG  +EG ++G N GGLL+RF+SL+GFLP+PQLSPS SC+EP KSI +IAK+L+GS + VKV+QADE N+KLI SEK A W K+S+ V VGDV
Subjt:  AAREYLESGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDV

Query:  YEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSR--RDKSRITLSIKQLEEDPLLETLDKVIPQDG
        +  RVGSVEDYGAF+HLRF DGLYHLTGLVHVSEVSWD VQDVRD+L         R   E  ++V+   ++KSRITLSIKQLE+DPLLETLDKVI +D 
Subjt:  YEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILIYDHCHAFHRWNAESVLLVSR--RDKSRITLSIKQLEEDPLLETLDKVIPQDG

Query:  SAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK
        S    S    +   I PLPGLETI+EELL+EDGI  ++INRQGFEKRVVSQDLQLWLSN P  + KF LLARAGRQVQEI LTTSL+Q G+KK
Subjt:  SAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTTTGCTGCAACGCTCGGATCTCTCTCTGCTTCTTCCTTTCTCTCACTCTTCGCCTCCATTGATGCTTCTTATTCCCCTTCAACCTTCTTCATTTTACCCCA
AAAATCCCTTTCTAAACGCCCTTCCAACTTCCCCCCCAGAGTTTCCCTCTCCGGTAAACCCGACCCTATTGCCGGAGTTCTAGACACTTCCCCTTCCTCCCCGGAATCAC
TTCGACGTTCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGAAAGTGGATTTATCTACGAGGGTAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTC
CGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAGAGAACCATACAAGAGTATTCAAGATATTGCGAAAAGCTTAATTGGTTC
CCTTGTATCAGTGAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTGGGAGATG
TCTATGAAGCTAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCGCTGATGGTCTTTATCATCTTACTGGGCTGGTACATGTATCAGAAGTTTCA
TGGGATCTAGTTCAAGATGTTAGAGACATATTAATCTATGACCATTGCCATGCATTTCACCGTTGGAATGCTGAATCTGTCTTATTGGTTTCACGCAGGGATAAGTCCAG
GATCACATTGTCGATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCG
ACAGTGCAATTATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTATAGTAGATATTCGTATCAACCGACAAGGATTTGAGAAACGGGTG
GTTTCACAAGACCTACAACTTTGGCTATCAAATGCACCTTCTGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTTCAAGAAATACAGCTGACAACATC
ACTCGATCAGGAAGGGTTGAAAAAAAAAGTCAACGACACCGAGCTTAAAGATGAGGTAATAGCAGAGTCAATGACACCAGGAAGACAAGGCGGCGGTGAAGTAGATATCG
AGCTTGAAGATCTCAAGTTTGATATGAAAGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAATCTTTGCTGCAACGCTCGGATCTCTCTCTGCTTCTTCCTTTCTCTCACTCTTCGCCTCCATTGATGCTTCTTATTCCCCTTCAACCTTCTTCATTTTACCCCA
AAAATCCCTTTCTAAACGCCCTTCCAACTTCCCCCCCAGAGTTTCCCTCTCCGGTAAACCCGACCCTATTGCCGGAGTTCTAGACACTTCCCCTTCCTCCCCGGAATCAC
TTCGACGTTCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGAAAGTGGATTTATCTACGAGGGTAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTC
CGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAGAGAACCATACAAGAGTATTCAAGATATTGCGAAAAGCTTAATTGGTTC
CCTTGTATCAGTGAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTGGGAGATG
TCTATGAAGCTAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCGCTGATGGTCTTTATCATCTTACTGGGCTGGTACATGTATCAGAAGTTTCA
TGGGATCTAGTTCAAGATGTTAGAGACATATTAATCTATGACCATTGCCATGCATTTCACCGTTGGAATGCTGAATCTGTCTTATTGGTTTCACGCAGGGATAAGTCCAG
GATCACATTGTCGATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCG
ACAGTGCAATTATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTATAGTAGATATTCGTATCAACCGACAAGGATTTGAGAAACGGGTG
GTTTCACAAGACCTACAACTTTGGCTATCAAATGCACCTTCTGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTTCAAGAAATACAGCTGACAACATC
ACTCGATCAGGAAGGGTTGAAAAAAAAAGTCAACGACACCGAGCTTAAAGATGAGGTAATAGCAGAGTCAATGACACCAGGAAGACAAGGCGGCGGTGAAGTAGATATCG
AGCTTGAAGATCTCAAGTTTGATATGAAAGATGGATAG
Protein sequenceShow/hide protein sequence
MPIFAATLGSLSASSFLSLFASIDASYSPSTFFILPQKSLSKRPSNFPPRVSLSGKPDPIAGVLDTSPSSPESLRRSRRSADWKAAREYLESGFIYEGRIEGSNAGGLLV
RFYSLMGFLPFPQLSPSHSCREPYKSIQDIAKSLIGSLVSVKVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVS
WDLVQDVRDILIYDHCHAFHRWNAESVLLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRV
VSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGLKKKVNDTELKDEVIAESMTPGRQGGGEVDIELEDLKFDMKDG