; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001776 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001776
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationChr11:373387..373913
RNA-Seq ExpressionHG10001776
SyntenyHG10001776
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]1.1e-3981.13Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MST++NN +DEETTRK EPKP+SEYVNLKVNGQDGSEVYFRI K+++L KLM SYCKRQ LE  TIAFL+DGHPIAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRGAI
        GG GAI
Subjt:  GGRGAI

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]1.6e-3577.88Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MST + ++N E  TRKPE +P + YVN+KVNGQDGSEVYFRI KRTQL KLMK YCKRQ LELRTIAFLLDGH IAG QTA+EL MEDGDEIDAMKHHGG
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRG
        GG G
Subjt:  GGRG

XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]1.2e-3879.44Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHH-G
        MST +NN  DEETTRK +PKP+SEYVNLKVNGQDGS+VYFRIFK+T++ KLM SYC+RQ LE  TIAFL+DGHPIAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHH-G

Query:  GGGRGAI
        GGG GAI
Subjt:  GGGRGAI

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]1.7e-4591.51Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MS A  ND+DEET RKPE KPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGH IAGTQTAEELEMEDGDEIDAMKHHGG
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRGAI
        G  GAI
Subjt:  GGRGAI

XP_038888535.1 small ubiquitin-related modifier 1-like isoform X2 [Benincasa hispida]2.6e-4187.74Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MS A  ND+DEET RKPE KPDSEYVNLK    DGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGH IAGTQTAEELEMEDGDEIDAMKHHGG
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRGAI
        G  GAI
Subjt:  GGRGAI

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 15.3e-4081.13Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MST++NN +DEETTRK EPKP+SEYVNLKVNGQDGSEVYFRI K+++L KLM SYCKRQ LE  TIAFL+DGHPIAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRGAI
        GG GAI
Subjt:  GGRGAI

A0A6J1D1W9 small ubiquitin-related modifier 1-like2.4e-3275Show/hide
Query:  EETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG
        EE+TRKPE +PD EYVN+KVNGQDGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLLDGH I G QT E+LE++DGDEIDAM HHGGGG
Subjt:  EETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG

A0A6J1GLF8 Small ubiquitin-related modifier7.4e-3473.83Show/hide
Query:  MSTAVNNDNDEETTRKPEPKP-DSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHG
        MST + ++N E   RKPE +P +  YVN+KVNGQDGSEVYFRI KRTQL KLMK+YCKRQ LELRTIAFLLDGH IAG QTA+EL MEDGD+IDAMKHHG
Subjt:  MSTAVNNDNDEETTRKPEPKP-DSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHG

Query:  GGGRGAI
        GGG G +
Subjt:  GGGRGAI

A0A6J1HW85 small ubiquitin-related modifier 1-like isoform X18.2e-2573.81Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEEL
        MST + ++N E  TRKPE +P + YVN+KVNGQDGSEVYFRI KRTQL KLMK YCKRQ LELRTIAFLLDGH IAG QTA+E+
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEEL

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X27.9e-3677.88Show/hide
Query:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG
        MST + ++N E  TRKPE +P + YVN+KVNGQDGSEVYFRI KRTQL KLMK YCKRQ LELRTIAFLLDGH IAG QTA+EL MEDGDEIDAMKHHGG
Subjt:  MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGG

Query:  GGRG
        GG G
Subjt:  GGRG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt37.2e-1850Show/hide
Query:  TRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG
        T + + KP +E++NLKV GQD +EV+F+I K T+  KLMK YC RQG  + ++ FL+DG  I   QT  EL+MEDGD+I+A+    GG
Subjt:  TRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG

P55852 Small ubiquitin-related modifier 12.4e-2154.17Show/hide
Query:  NDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRG
        N EE  +   P     ++NLKV GQDG+EV+FRI + TQLKKLM +YC RQ +++ +IAFL DG  +   QT +EL+MEDGDEIDAM H  GG  G
Subjt:  NDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRG

P55857 Small ubiquitin-related modifier 11.1e-2156.04Show/hide
Query:  EETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG
        EE  +    +    ++NLKV GQDG+EV+FRI + TQLKKLM +YC RQ +++  IAFL DG  + G QT +ELEMEDGDEIDAM H  GG
Subjt:  EETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG

Q17QV3 Small ubiquitin-related modifier 37.2e-1851.06Show/hide
Query:  ETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRGA
        E   K   K +++++NLKV GQDGS V F+I + T L KLMK+YC+RQGL +R I F  DG PI  T T  +LEMED D ID  +   GG R A
Subjt:  ETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRGA

Q9FLP6 Small ubiquitin-related modifier 21.7e-2258.89Show/hide
Query:  TRKPEPKPD-SEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG
        T + + KPD   ++NLKV GQDG+EV+FRI + TQLKKLM +YC RQ ++  +IAFL DG  +   QT +ELEMEDGDEIDAM H  GGG
Subjt:  TRKPEPKPD-SEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.7e-2254.17Show/hide
Query:  NDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRG
        N EE  +   P     ++NLKV GQDG+EV+FRI + TQLKKLM +YC RQ +++ +IAFL DG  +   QT +EL+MEDGDEIDAM H  GG  G
Subjt:  NDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRG

AT5G55160.1 small ubiquitin-like modifier 21.2e-2358.89Show/hide
Query:  TRKPEPKPD-SEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG
        T + + KPD   ++NLKV GQDG+EV+FRI + TQLKKLM +YC RQ ++  +IAFL DG  +   QT +ELEMEDGDEIDAM H  GGG
Subjt:  TRKPEPKPD-SEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGG

AT5G55160.2 small ubiquitin-like modifier 27.1e-2151.46Show/hide
Query:  TRKPEPKPD-SEYVNLKVNGQ-------------DGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHG
        T + + KPD   ++NLKV GQ             DG+EV+FRI + TQLKKLM +YC RQ ++  +IAFL DG  +   QT +ELEMEDGDEIDAM H  
Subjt:  TRKPEPKPD-SEYVNLKVNGQ-------------DGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHG

Query:  GGG
        GGG
Subjt:  GGG

AT5G55170.1 small ubiquitin-like modifier 32.6e-1548.86Show/hide
Query:  KPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGR
        KP  +    +V LKV  QDG EV F+  K   LKKLM  YC R+GL+L   AF+ +G  I G +T +EL+MEDGD IDA +   GG R
Subjt:  KPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGR

AT5G55856.1 Ubiquitin-like superfamily protein1.0e-1141.67Show/hide
Query:  EPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG
        +P   S ++ +KV  QD   VYFRI +  +L+K+M +Y  + G+E+ T+ FL DG+ I   QT  EL +ED DEI+A     GG
Subjt:  EPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAGCGGTGAACAACGACAATGATGAAGAAACAACCCGAAAACCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAGGTCAATGGACAGGATGGGAGTGA
GGTGTATTTCAGGATATTTAAGAGAACCCAACTCAAGAAACTTATGAAATCGTACTGTAAACGACAAGGGTTAGAGCTAAGAACCATTGCGTTTCTCTTGGACGGCCATC
CCATTGCCGGAACTCAAACGGCCGAAGAGCTGGAGATGGAGGATGGGGATGAAATTGATGCAATGAAACACCACGGCGGCGGCGGCCGGGGAGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAGCGGTGAACAACGACAATGATGAAGAAACAACCCGAAAACCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAGGTCAATGGACAGGATGGGAGTGA
GGTGTATTTCAGGATATTTAAGAGAACCCAACTCAAGAAACTTATGAAATCGTACTGTAAACGACAAGGGTTAGAGCTAAGAACCATTGCGTTTCTCTTGGACGGCCATC
CCATTGCCGGAACTCAAACGGCCGAAGAGCTGGAGATGGAGGATGGGGATGAAATTGATGCAATGAAACACCACGGCGGCGGCGGCCGGGGAGCAATTTGA
Protein sequenceShow/hide protein sequence
MSTAVNNDNDEETTRKPEPKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTIAFLLDGHPIAGTQTAEELEMEDGDEIDAMKHHGGGGRGAI