; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001788 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001788
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmyb-like transcription factor family protein
Genome locationChr11:470935..472683
RNA-Seq ExpressionHG10001788
SyntenyHG10001788
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR043363 - Transcription factor DIVARICATA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044592.1 myb-like protein J [Cucumis melo var. makuwa]9.2e-1741.4Show/hide
Query:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK
        + + + I TT  N      +++  L SD+V +         +  +L  LPP PP+          +S  IK  N    W   EHRLFL GM +  K  WK
Subjt:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK

Query:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL
         IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P  L +V A L
Subjt:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL

KAG5237890.1 transcription factor SRM [Salix suchowensis]4.6e-1652.75Show/hide
Query:  PPNGAVAAINGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD
        PP+G +    G+A     +KK   W E EH+LFLVG+  F KG+W+SI+  V+I+++  QVASHAQKYF RQ   K+ERKR SIHDI +VD
Subjt:  PPNGAVAAINGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD

TYK16992.1 myb-like protein J [Cucumis melo var. makuwa]2.7e-1651.38Show/hide
Query:  SLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPV
        SLPP PP   N           ++KI +  W   EHRLFL GM +  K  WK IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P 
Subjt:  SLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPV

Query:  LLMQVRARL
         L +V A L
Subjt:  LLMQVRARL

XP_008454484.1 PREDICTED: myb-like protein J [Cucumis melo]9.2e-1741.4Show/hide
Query:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK
        + + + I TT  N      +++  L SD+V +         +  +L  LPP PP+          +S  IK  N    W   EHRLFL GM +  K  WK
Subjt:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK

Query:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL
         IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P  L +V A L
Subjt:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL

XP_023522314.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo]2.3e-2362.63Show/hide
Query:  VAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRARLGLPP
        VAA NG  S S   +  W   EH+LFLVGM IF  GNWKSIANKV+++K+H QVASHAQK+  RQ +PKE+RKR SIHDI+TVDP LL +V ARL   P
Subjt:  VAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRARLGLPP

TrEMBL top hitse value%identityAlignment
A0A1S3BZH7 myb-like protein J4.5e-1741.4Show/hide
Query:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK
        + + + I TT  N      +++  L SD+V +         +  +L  LPP PP+          +S  IK  N    W   EHRLFL GM +  K  WK
Subjt:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK

Query:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL
         IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P  L +V A L
Subjt:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL

A0A2P6SCI3 Putative transcription factor MYB/SANT family3.8e-1651.06Show/hide
Query:  GEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRARLGLPP
        GEA+  K K K W E+EH+LFLVG+  F KG+W+SI+  V+++++  QVASHAQKYF RQ+  K+ERKR SIHDI +V+   +     R  +PP
Subjt:  GEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRARLGLPP

A0A4U5R5S8 Uncharacterized protein8.4e-1652.75Show/hide
Query:  PPNGAVAAINGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD
        PP+G +    G+A     +KK   W E EH+LFLVG++ F KG+W+SI+  V+I+++  QVASHAQKYF RQ   K+ERKR SIHDI +VD
Subjt:  PPNGAVAAINGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD

A0A5A7TMR3 Myb-like protein J4.5e-1741.4Show/hide
Query:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK
        + + + I TT  N      +++  L SD+V +         +  +L  LPP PP+          +S  IK  N    W   EHRLFL GM +  K  WK
Subjt:  YLNSNDIQTTEQNLSALPPSDHF-LSSDVVNLY-STSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKN----WCELEHRLFLVGMDIFPKGNWK

Query:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL
         IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P  L +V A L
Subjt:  SIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPVLLMQVRARL

A0A5D3CZL0 Myb-like protein J1.3e-1651.38Show/hide
Query:  SLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPV
        SLPP PP   N           ++KI +  W   EHRLFL GM +  K  WK IA+ V+I+K+HKQVASHAQKYF H   L K +RKR SIHDI TV+P 
Subjt:  SLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYF-HRQTLPKEERKRPSIHDINTVDPV

Query:  LLMQVRARL
         L +V A L
Subjt:  LLMQVRARL

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS19.0e-1544.76Show/hide
Query:  GAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRA
        G     +G  S SK +++      W E EHRLFL+G+D F KG+W+SI+   +IS++  QVASHAQKYF R      +R+R SIHDI +V      QV A
Subjt:  GAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRA

Query:  RLGLP
        + G P
Subjt:  RLGLP

Q8LH59 Transcription factor MYBS19.0e-1544.76Show/hide
Query:  GAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRA
        G     +G  S SK +++      W E EHRLFL+G+D F KG+W+SI+   +IS++  QVASHAQKYF R      +R+R SIHDI +V      QV A
Subjt:  GAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRA

Query:  RLGLP
        + G P
Subjt:  RLGLP

Q8S9H7 Transcription factor DIVARICATA4.9e-1343.68Show/hide
Query:  GAVAAINGEASSSKIKK-KNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD
        G   + +G  S  + KK   W E EH+LFL+G+  + KG+W++I+   +I+++  QVASHAQKYF RQ    ++++R SIHDI TV+
Subjt:  GAVAAINGEASSSKIKK-KNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD

Q9FKF9 Probable transcription factor At5g616209.3e-1239.08Show/hide
Query:  NGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD
        +G + +  G+ +  K K K W E EHR FL+G++   KG+W+ IA   + +++  QVASHAQKYF R  +  + ++R S+ DI+  D
Subjt:  NGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD

Q9FNN6 Transcription factor SRM15.8e-1446.25Show/hide
Query:  GEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTV
        G++ S + ++K   W E EHRLFL+G+D + KG+W+SI+   +++++  QVASHAQKYF R     ++R+R SIHDI +V
Subjt:  GEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTV

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein1.7e-1644.33Show/hide
Query:  PPPPPNGAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD
        P P  +G  ++  G +  S+ +++      W E EHRLFL+G+D F KG+W+SI+   +IS++  QVASHAQKYF R      +R+R SIHDI TV+
Subjt:  PPPPPNGAVAAINGEASSSKIKKKN-----WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVD

AT3G11280.1 Duplicated homeodomain-like superfamily protein7.1e-1546.25Show/hide
Query:  NGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINT
        +G   S + +KK   W E EHR FL+G+  + KG+W++I+   ++SK+  QVASHAQKY+ RQ    ++++RPSIHDI T
Subjt:  NGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINT

AT3G11280.2 Duplicated homeodomain-like superfamily protein7.1e-1546.25Show/hide
Query:  NGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINT
        +G   S + +KK   W E EHR FL+G+  + KG+W++I+   ++SK+  QVASHAQKY+ RQ    ++++RPSIHDI T
Subjt:  NGEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINT

AT5G04760.1 Duplicated homeodomain-like superfamily protein1.8e-1847.25Show/hide
Query:  GAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLM
        G ++  +    S + +   W E EH+LFL+G+  + KG+W+SI+  V+++++  QVASHAQKYF RQ   K+ERKR SIHDI TVD  L M
Subjt:  GAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLM

AT5G08520.1 Duplicated homeodomain-like superfamily protein4.1e-1546.25Show/hide
Query:  GEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTV
        G++ S + ++K   W E EHRLFL+G+D + KG+W+SI+   +++++  QVASHAQKYF R     ++R+R SIHDI +V
Subjt:  GEASSSKIKKKN--WCELEHRLFLVGMDIFPKGNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATAACAATAGCTACTTGCCTTCTTCCTCTGTTCTTCCAAATCAGACTCTACAGTTTGATCAATCGTCATTCCCTTCATATTACCAGATCGATAATACGGTGTT
TGAGCAGTCGCCGATGACAATGACGCCGCCTCCTCTGCCGCAGGCGATGAATATTCCGCCAAATCAAGCAATGACAATTAACCGCCCTGGCGAGTACAAAACAAATGCGG
AAATTATTTGTGAGAATTATCTGAAGCAATATTTCAGTCCGTATGTTACCGATCATAATGTTGTCGATTATTCTAATTATGTTGATCCTAATCATGTTGATCCGTCGTTA
ATCAATCGGAGCGGCGAGGCAAAGTTGAATTACGATGATTCGGATTTCTCAGAGCTTGATTACTTGAACTCCAATGATATTCAGACCACAGAGCAGAATTTATCTGCTCT
GCCTCCGTCTGATCACTTCCTTTCTTCCGACGTCGTCAATTTATACTCCACAAGTAATTGGCCGCTTGCGGCGGAGAGTTTGCCGCCGTTGCCGCCTCCTCCGCCCAATG
GAGCTGTAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAAAATTGGTGCGAATTGGAGCACCGTCTATTTTTGGTGGGGATGGATATATTTCCCAAG
GGCAATTGGAAAAGCATAGCAAATAAAGTGATAATCTCAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTCATCGTCAAACGTTACCAAAAGAAGAGCG
GAAGAGGCCGAGTATTCACGATATCAACACTGTCGACCCCGTATTGTTGATGCAGGTGCGTGCCCGTCTTGGACTTCCACCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATAACAATAGCTACTTGCCTTCTTCCTCTGTTCTTCCAAATCAGACTCTACAGTTTGATCAATCGTCATTCCCTTCATATTACCAGATCGATAATACGGTGTT
TGAGCAGTCGCCGATGACAATGACGCCGCCTCCTCTGCCGCAGGCGATGAATATTCCGCCAAATCAAGCAATGACAATTAACCGCCCTGGCGAGTACAAAACAAATGCGG
AAATTATTTGTGAGAATTATCTGAAGCAATATTTCAGTCCGTATGTTACCGATCATAATGTTGTCGATTATTCTAATTATGTTGATCCTAATCATGTTGATCCGTCGTTA
ATCAATCGGAGCGGCGAGGCAAAGTTGAATTACGATGATTCGGATTTCTCAGAGCTTGATTACTTGAACTCCAATGATATTCAGACCACAGAGCAGAATTTATCTGCTCT
GCCTCCGTCTGATCACTTCCTTTCTTCCGACGTCGTCAATTTATACTCCACAAGTAATTGGCCGCTTGCGGCGGAGAGTTTGCCGCCGTTGCCGCCTCCTCCGCCCAATG
GAGCTGTAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAAAATTGGTGCGAATTGGAGCACCGTCTATTTTTGGTGGGGATGGATATATTTCCCAAG
GGCAATTGGAAAAGCATAGCAAATAAAGTGATAATCTCAAAATCACACAAGCAAGTGGCTAGCCATGCTCAAAAGTACTTTCATCGTCAAACGTTACCAAAAGAAGAGCG
GAAGAGGCCGAGTATTCACGATATCAACACTGTCGACCCCGTATTGTTGATGCAGGTGCGTGCCCGTCTTGGACTTCCACCAGCATAA
Protein sequenceShow/hide protein sequence
MDNNNSYLPSSSVLPNQTLQFDQSSFPSYYQIDNTVFEQSPMTMTPPPLPQAMNIPPNQAMTINRPGEYKTNAEIICENYLKQYFSPYVTDHNVVDYSNYVDPNHVDPSL
INRSGEAKLNYDDSDFSELDYLNSNDIQTTEQNLSALPPSDHFLSSDVVNLYSTSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRLFLVGMDIFPK
GNWKSIANKVIISKSHKQVASHAQKYFHRQTLPKEERKRPSIHDINTVDPVLLMQVRARLGLPPA